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Information on SUBCLASS 0.1.38
Subclass Accession number: 5225
Subclass: 0.1.38 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 8.8 +/- 11.6
Average RMSD (Å) : 0.580 +/- 0.259

Consensus geometry
d (Å): 5 delta (°): 0-45 theta (°): 0-45 rho (°): 225-270
Consensus Sequence: pXhh
(φψ)-conformation: aabb
Pattern: [AEPQ][ader]xx[DRS]x[FIL][cfil]
Conservation:0.709-0.845-0.329-0.9510.643-0.4001.911-0.738
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
16vp_A_25016vp   A250257PDLFDCLCHHHHTTEEaaaaaaxb
1ako_*_851ako   -8592EEAQRRIIHHHHTTEEaaaaaabb
1aua_*_2341aua   -234241PVTVSKIFHHHHTTEEaaaaaaxb
1jbk_A_3271jbk   A327334AALERRFQHHHHTTEEaaaaaabb
1q16_B_2921q16   B294301QRQLDVFLHHHHTTEEaaaaaaxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aua_*_2341aua   *     BOGB-OCTYLGLUCOSIDE T - 236
1aua_*_2341aua   *     BOGB-OCTYLGLUCOSIDE K - 239
1aua_*_2341aua   *     BOGB-OCTYLGLUCOSIDE I - 240
1aua_*_2341aua   *     BOGB-OCTYLGLUCOSIDE I - 242

Clusters included in this Subclass
CLUSTER: HE.1.68
CLUSTER: HE.2.125