Information on SUBCLASS 0.1.38 |
Subclass Accession number: 5225
Subclass: 0.1.38 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 8.8 +/- 11.6 Average RMSD (Å) : 0.580 +/- 0.259 Consensus geometry
|
Consensus Sequence: | pXhh |
(φψ)-conformation: | aabb |
Pattern: | [AEPQ] | [ader] | x | x | [DRS] | x | [FIL] | [cfil] |
Conservation: | 0.709 | -0.845 | -0.329 | -0.951 | 0.643 | -0.400 | 1.911 | -0.738 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
16vp_A_250 | 16vp | A | 250 | 257 | PDLFDCLC | HHHHTTEE | aaaaaaxb |
1ako_*_85 | 1ako | - | 85 | 92 | EEAQRRII | HHHHTTEE | aaaaaabb |
1aua_*_234 | 1aua | - | 234 | 241 | PVTVSKIF | HHHHTTEE | aaaaaaxb |
1jbk_A_327 | 1jbk | A | 327 | 334 | AALERRFQ | HHHHTTEE | aaaaaabb |
1q16_B_292 | 1q16 | B | 294 | 301 | QRQLDVFL | HHHHTTEE | aaaaaaxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1aua_*_234 | 1aua | * | BOGB-OCTYLGLUCOSIDE | T - 236 |
1aua_*_234 | 1aua | * | BOGB-OCTYLGLUCOSIDE | K - 239 |
1aua_*_234 | 1aua | * | BOGB-OCTYLGLUCOSIDE | I - 240 |
1aua_*_234 | 1aua | * | BOGB-OCTYLGLUCOSIDE | I - 242 |
Clusters included in this Subclass |
CLUSTER: HE.1.68 |
CLUSTER: HE.2.125 |