Information on SUBCLASS 0.1.41 |
Subclass Accession number: 5228
Subclass: 0.1.41 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 20.6 +/- 23.8 Average RMSD (Å) : 0.480 +/- 0.192 Consensus geometry
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Consensus Sequence: | hhXp |
(φψ)-conformation: | aaba |
Pattern: | [gr] | x | [KST] | [ILV] | [CFIV] | [an] | [ags] | [flv] | [as] | [DEKT] | [EKR] | [FV] | x | [CLV] | x | [ADTV] | [adr] |
Conservation: | -0.855 | -0.582 | 0.726 | 2.084 | 0.181 | -0.754 | -0.568 | -0.645 | 0.007 | 0.133 | 1.820 | 1.113 | -0.122 | 0.675 | -1.041 | -0.746 | -1.427 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1m0s_A_100 | 1m0s | A | 102 | 118 | REKIVAALAKKFICIVD | HHHHHHHHEEEEEEEEE | aaaaaaaaxabxbxbbx |
1o8b_A_100 | 1o8b | A | 102 | 118 | REKIIASVAEKFICIAD | HHHHHHHHEEEEEEEEE | aaaaaaaaxabxbxbbx |
1pvg_A_145 | 1pvg | A | 145 | 161 | GAKLCNIFSTEFILETA | HHHHHHHTEEEEEEEEE | aaaaaaaababbbbbbb |
1q4r_A_84 | 1q4r | A | 89 | 105 | FATIFLGSLDKVLVIDY | HHHHHHHTEEEEEEEEE | aaaaaaaaxabbbbbbb |
1s16_A_1115 | 1s16 | A | 1115 | 1131 | GISVVNALSKRVEVNVR | HHHHHHHTEEEEEEEEE | aaaaaaaababbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1o8b_A_100 | 1o8b | A | AC2ABF BINDING SITE FOR CHAIN F | E - 103 |
Clusters included in this Subclass |
CLUSTER: HE.0.10 |