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Information on SUBCLASS 0.1.65
Subclass Accession number: 5252
Subclass: 0.1.65 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 7.4 +/- 9.9
Average RMSD (Å) : 0.533 +/- 0.058

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: pXhX
(φψ)-conformation: aabb
Pattern: [FGL][DV]x[FLM][CGI][QRS]x[FY]x
Conservation:-0.690-0.106-0.6150.587-0.6150.211-0.4652.382-0.690
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1m98_A_2121m98   A212220FDNLISLFAHHHHHTTEEaaaaaaaxx
1nh8_A_1951nh8   A205213GVVFGQQYLHHHHHTTEEaaaaaaabb
1nq7_A_2881nq7   A304312LVRMCRAFNHHHHGGGEEaaaaaaabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1m98_A_2121m98   A     HEQ3-[18-(4-HYDROXY-2,6,6-TRIMETHYL-CYCLOHEX-1-ENYL)-3,7, 12,16-TETRAMETHYL-OCTADECA-1,3,5,7,9,11,13,15, 17-NONAENYL]-2,4,4-TRIMETHYL-CYCLOHEX-2-ENONE L - 225
1m98_A_2121m98   A     HEQ3-[18-(4-HYDROXY-2,6,6-TRIMETHYL-CYCLOHEX-1-ENYL)-3,7, 12,16-TETRAMETHYL-OCTADECA-1,3,5,7,9,11,13,15, 17-NONAENYL]-2,4,4-TRIMETHYL-CYCLOHEX-2-ENONE Q - 226
1nh8_A_1951nh8   A     HISHISTIDINE D - 216
1nh8_A_1951nh8   A     HISHISTIDINE Y - 217
1nh8_A_1951nh8   A     HISHISTIDINE D - 218
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID L - 300
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID E - 301
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID V - 303
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID L - 304
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID R - 306
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID M - 307
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID R - 309
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID A - 310

Clusters included in this Subclass
CLUSTER: HE.2.145