ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 0.1.53

Subclass Accession number: 53
Subclass: 0.1.53

Type: HE alpha-beta
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 7 (>50 %)
GO : GO:0001716 (>50 %)  GO:0016638 (>50 %)  GO:0016641 (>50 %)
SCOP : 51904 (>50 %)  51905 (>50 %)  51913 (>50 %)

Number of loops: 2

Average sequence ID (%) : 8.7 +/- 0.0
Average RMSD (Å) : 0.400 +/- 0.000

Consensus geometry

d (Å): 9

delta (°): 90-135

theta (°): 135-180

rho (°): 135-180

Consensus Sequence:	pXhp
(φψ)-conformation:	aabb

Pattern:	[ES]	[IM]	[GV]	[CN]	[KS]	[IT]	x	[DT]	[V]	[AV]	[RS]	[HN]	[NY]	[P]	[EN]	[HI]	[FV]	[KR]	[KV]	[FV]	[AS]	[IL]	[GV]
Conservation:	-0.141	0.241	-1.099	-0.141	-0.141	-0.524	-1.099	-0.141	1.198	-0.333	-0.524	1.198	-0.141	3.495	0.241	-0.716	-0.333	0.816	-0.907	-0.333	0.050	0.433	-1.099

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1obr_*_12	1obr	-	14	36	EMVNKINTVASNYPNIVKKFSIG	HHHHHHHHHHHH-TTTEEEEEEE	aaaaaaaaaaaaaaaabbxbbae
1ono_A_12	1ono	A	12	34	SIGCSTLDVVRHNPEHFRVVALV	HHHHHHHHHHHH-TTTEEEEEEE	aaaaaaaaaaaaaaaabbxabbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1obr_*_12	1obr	*	CACALCIUM ION	E - 14

Clusters included in this Subclass

CLUSTER: HE.3.43