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Information on SUBCLASS 1.3.7
Subclass Accession number: 5301
Subclass: 1.3.7 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 7.6 +/- 8.3
Average RMSD (Å) : 0.650 +/- 0.100

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: pphXh
(φψ)-conformation: aappb
Pattern: xxx[EHRY][NY][KPRS][DHNQ]x[ENP][IMV]x
Conservation:-1.157-0.494-0.6310.1951.322-0.2550.646-1.1570.5481.839-0.856
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cse_I_181cse   I2535FTLHYPQYNVYHHHH-TTSEEEaaaaaaaxxbb
1dbq_A_1281dbq   A133143MLEEYRHIPMVHHHHTTTS-EEaaaaaaaxwbb
1k8u_A_591k8u   A5969DLDRNKDQEVNHHHHTTT-EEEaaaaaaaxxbx
1orr_A_931orr   A111121VRQYNSNCNIIHHHH-TT-EEEaaaaaaapxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1k8u_A_591k8u   A     MSESELENOMETHIONINE D - 59
1k8u_A_591k8u   A     MSESELENOMETHIONINE L - 60
1k8u_A_591k8u   A     MSESELENOMETHIONINE D - 61
1k8u_A_591k8u   A     MSESELENOMETHIONINE R - 62
1orr_A_931orr   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 99
1orr_A_931orr   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE N - 100
1orr_A_931orr   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 123
1orr_A_931orr   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 124
1orr_A_931orr   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 125
1orr_A_931orr   A     CDPCYTIDINE-5'-DIPHOSPHATE T - 125

Clusters included in this Subclass
CLUSTER: HE.5.175