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Information on SUBCLASS 1.3.8
Subclass Accession number: 5302
Subclass: 1.3.8 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 6.1 (>75 %)  6.1.1 (>75 %)  
GO : GO:0004812 (>75 %)  GO:0008452 (>75 %)  GO:0016874 (>75 %)  GO:0016875 (>75 %)  GO:0016876 (>75 %)  GO:0016886 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 5.6 +/- 8.2
Average RMSD (Å) : 0.775 +/- 0.096

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 45-90 rho (°): 45-90
Consensus Sequence: pXXXh
(φψ)-conformation: aapbb
Pattern: xxx[AFV][DHNP][AGQR]xx[HILW]
Conservation:-0.481-0.511-0.8011.3831.5950.157-1.2800.580-0.641
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1acc_*_6091acc   -612620VKEAHREVIHHHTT--EEaaaaaaxxa
1f7u_A_511f7u   A5260SLIFPALEWHHHGGG-EEaaaaaaxbx
1ile_*_4921ile   -492500RPYVDQVELHHHHTT-EEaaaaaabbb
1oi2_A_2431oi2   A253261TLLVNGSYHHHHHS--EEaaaaaaxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f7u_A_511f7u   A     DHU5,6-DIHYDROURIDINE-5'-PHOSPHATE L - 58
1f7u_A_511f7u   A     DHU5,6-DIHYDROURIDINE-5'-PHOSPHATE E - 59
1f7u_A_511f7u   A     DHU5,6-DIHYDROURIDINE-5'-PHOSPHATE W - 60

Clusters included in this Subclass
CLUSTER: HE.3.166