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Information on SUBCLASS 1.3.9
Subclass Accession number: 5303
Subclass: 1.3.9 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 8.3 +/- 13.8
Average RMSD (Å) : 0.600 +/- 0.200

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: pXhph
(φψ)-conformation: aapbb
Pattern: [EKRS][KRSW][AEFL][ILV][ERSY]x[CIY][HKR][CFIV]x
Conservation:0.357-0.664-1.3941.739-0.810-0.4320.4901.3650.065-0.716
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f8r_A_2961f8r   A296305SRAVRLIKFNHHHHTTSEEEaaaaaaxxbb
1g9m_G_4751g9m   G480489RSELYKYKVVHHHHTTEEEEaaaaaabbxb
1i5z_A_91i5z   A1221EWFLSHCHIHHHHHTTSEEEaaaaaabbbb
1j7l_A_81j7l   A1120KKLIEKYRCVHHHHTTSEEEaaaaaaxxxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f8r_A_2961f8r   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 298
1f8r_A_2961f8r   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 302
1g9m_G_4751g9m   G     IOH2-PROPANOL, ISOPROPANOL M - 475
1i5z_A_91i5z   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL P - 9
1i5z_A_91i5z   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL T - 10
1i5z_A_91i5z   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL W - 13

Clusters included in this Subclass
CLUSTER: HE.3.161