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Information on SUBCLASS 2.1.15
Subclass Accession number: 5335
Subclass: 2.1.15 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.2 (>75 %)  1.2.1 (>75 %)  
GO : GO:0016620 (>75 %)  GO:0016903 (>75 %)  
SCOP : 53719 (>75 %)  53720 (>75 %)  53721 (>75 %)  
Number of loops: 6

Average sequence ID (%) : 15.4 +/- 21.9
Average RMSD (Å) : 0.850 +/- 0.176

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: Xphcph
(φψ)-conformation: aalpbb
Pattern: x[ikltv]x[AEGS][AFGMV]xxxx[GKLV][GKT][hrty][AIV]x[LTVW]x
Conservation:-0.863-0.623-0.3480.812-0.728-1.444-0.248-0.8311.543-1.2011.127-0.6751.6950.8050.1990.779
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a4s_A_2431a4s   A248263KVMEMSAKTVKHVTLEHHHHHHHTTT-EEEEEaaaaaaaaalxxbbbb
1auv_A_2851auv   A290305DIASVVALTKTYATTEHHHHHHHTTTS-EEEEaaaaaaaaalbxbbbb
1bxs_A_2471bxs   A253268IKEAAGKSNLKRVSLEHHHHHHHTT--EEEEEaaaaaaaaavxxbbbb
1cp2_A_141cp2   A2035NLTSGLHAMGKTIMVVHHHHHHHTTT--EEEEaaaaaaaaavxbbbbb
1kfu_L_2001kfu   L200215TTEGFEDFTGGIAEWYHHHHHHHTTSSEEEEEaaaaaaaaNgxbxbbb
1o04_A_2471o04   A253268IQVAAGSSNLKRVTLEHHHHHHHTT--EEEEEaaaaaaaFavpxbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1auv_A_2851auv   A     MSESELENOMETHIONINE F - 288
1auv_A_2851auv   A     MSESELENOMETHIONINE Q - 289
1auv_A_2851auv   A     MSESELENOMETHIONINE I - 291
1auv_A_2851auv   A     MSESELENOMETHIONINE A - 292
1auv_A_2851auv   A     MSESELENOMETHIONINE V - 294
1auv_A_2851auv   A     MSESELENOMETHIONINE V - 295
1auv_A_2851auv   A     MSESELENOMETHIONINE T - 298
1auv_A_2851auv   A     MSESELENOMETHIONINE T - 300
1auv_A_2851auv   A     MSESELENOMETHIONINE Y - 301
1auv_A_2851auv   A     MSESELENOMETHIONINE A - 302
1auv_A_2851auv   A     MSESELENOMETHIONINE T - 303
1auv_A_2851auv   A     MSESELENOMETHIONINE T - 304
1bxs_A_2471bxs   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 247
1bxs_A_2471bxs   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 249
1bxs_A_2471bxs   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 250
1bxs_A_2471bxs   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 252
1bxs_A_2471bxs   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 253
1bxs_A_2471bxs   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE E - 268
1o04_A_2471o04   A     MGMAGNESIUM ION I - 249
1o04_A_2471o04   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 249
1o04_A_2471o04   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 252
1o04_A_2471o04   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 267

Clusters included in this Subclass
CLUSTER: HE.5.102