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Information on SUBCLASS 2.2.12
Subclass Accession number: 5358
Subclass: 2.2.12 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 21.5 +/- 19.1
Average RMSD (Å) : 0.660 +/- 0.297

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: PXhcLX
(φψ)-conformation: aapabb
Pattern: [AITV]x[EKQR]x[EKRT][LVY][AFLTV][HP]x[AFV][DKS][IL]x
Conservation:-0.141-0.5640.648-1.130-0.0670.179-0.9192.017-1.208-0.4280.5641.643-0.595
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jxh_A_1191jxh   A124136TLRVRLLPQVSLIHHHHHTGGG-SEEaaaaaaaaaxabb
1kgd_A_8651kgd   A876888ILQRTYAHYFDLTHHHHHHGGG-SEEaaaaaaaaaxabb
1lhp_A_1331lhp   A135147VYREKVVPVADIIHHHHTTGGG-SEEaaaaaaaaaxabb
1m1n_A_2591m1n   A259271ISEIELTPKVKLNHHHHHHGGG-SEEaaaaaaaaaxabb
1ub0_A_1171ub0   A122134ALKERLFPLADLVHHHHHTGGG-SEEaaaaaaaaaxabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kgd_A_8651kgd   A     FMTFORMIC ACID S - 866
1kgd_A_8651kgd   A     FMTFORMIC ACID L - 867
1kgd_A_8651kgd   A     FMTFORMIC ACID L - 870
1ub0_A_1171ub0   A     GOLGLYCEROL D - 132

Clusters included in this Subclass
CLUSTER: HE.5.377
CLUSTER: HE.6.133