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Information on SUBCLASS 2.3.17
Subclass Accession number: 5379
Subclass: 2.3.17 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 4.1 (>75 %)  4.1.2 (>75 %)  
GO : GO:0005515 (>75 %)  GO:0016829 (>75 %)  GO:0016830 (>75 %)  GO:0016832 (>75 %)  GO:0051082 (>75 %)  
SCOP : 53066 (>75 %)  53067 (>75 %)  53068 (>75 %)  53638 (>75 %)  53639 (>75 %)  53640 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 23.7 +/- 36.1
Average RMSD (Å) : 0.450 +/- 0.100

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: ppppXX
(φψ)-conformation: aababb
Pattern: [DR][AET][AIL][CGS][EQ][hr][ATV][AK]x[AET][LM][KQS][KNS][HRS][KST][aq][ATV]x[ILW]
Conservation:0.475-0.658-0.397-0.4942.787-0.511-0.2190.330-0.951-0.6582.2040.2210.383-0.250-0.056-1.422-0.219-0.463-0.103
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bup_A_2571bup   A264282RTACERAKRTLSSSTQASIHHHHHHHHHHHTTSSEEEEaaaaaaaaaaaaababbbb
1e4c_P_1341e4c   P134152RELSEHVALALKNRKATLLHHHHHHHHHHTSS-SEEEEaaaaaaaaaaaaababbxb
1ojr_A_1911ojr   A191209DAIGQATAQEMQKHSLVLWHHHHHHHHHHHTT-SEEEEaaaaaaaaaaaaababbxb
1s3x_A_2571s3x   A264282RTACERAKRTLSSSTQASLHHHHHHHHHHTTTSSEEEEaaaaaaaaaaaaababbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bup_A_2571bup   A     ADPADENOSINE-5'-DIPHOSPHATE E - 268
1bup_A_2571bup   A     ADPADENOSINE-5'-DIPHOSPHATE K - 271
1bup_A_2571bup   A     ADPADENOSINE-5'-DIPHOSPHATE R - 272
1bup_A_2571bup   A     ADPADENOSINE-5'-DIPHOSPHATE T - 273
1bup_A_2571bup   A     ADPADENOSINE-5'-DIPHOSPHATE S - 275
1e4c_P_1341e4c   P     ZNZINC ION L - 152
1ojr_A_1911ojr   A     ZNZINC ION W - 209
1ojr_A_1911ojr   A     PO4PHOSPHATE ION W - 209
1ojr_A_1911ojr   A     2HADIHYDROXYACETONE W - 209
1s3x_A_2571s3x   A     ADPADENOSINE-5'-DIPHOSPHATE S - 276

Clusters included in this Subclass
CLUSTER: HE.4.362
CLUSTER: HE.5.382