Information on SUBCLASS 2.3.18 |
Subclass Accession number: 5380
Subclass: 2.3.18 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 19.6 +/- 16.3 Average RMSD (Å) : 0.400 +/- 0.000 Consensus geometry
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Consensus Sequence: | XXhcXh |
(φψ)-conformation: | aababb |
Pattern: | [AKT] | [AG] | [EKY] | [I] | [AV] | [DEK] | [FL] | [IL] | [GT] | [EHP] | x | [AVY] | [DK] | x | [LV] | [MVW] | x |
Conservation: | -0.987 | 0.506 | -0.860 | 2.312 | 0.215 | 0.282 | 0.506 | 1.285 | 0.256 | -0.480 | -0.987 | -1.114 | 0.780 | -0.353 | 0.739 | -0.480 | -1.622 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1lbq_A_287 | 1lbq | A | 287 | 303 | TAEIAEFLGPKVDGLMF | HHHHHHHHGGG-S-EEE | aaaaaaaaaaababbbb |
1qf5_A_16 | 1qf5 | A | 16 | 32 | KGKIVDLLTERAKYVVR | HHHHHHHHGGG-SEEEE | aaaaaaaaaaababbbx |
1xo1_A_129 | 1xo1 | A | 133 | 149 | AAYIVKLIGHLYDHVWL | HHHHHHHHGGGSS-EEE | aaaaaaaaaaababbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qf5_A_16 | 1qf5 | A | PO4PHOSPHATE ION | K - 16 |
1qf5_A_16 | 1qf5 | A | MGMAGNESIUM ION | K - 16 |
1qf5_A_16 | 1qf5 | A | GDPGUANOSINE-5'-DIPHOSPHATE | K - 16 |
1qf5_A_16 | 1qf5 | A | GDPGUANOSINE-5'-DIPHOSPHATE | G - 17 |
1qf5_A_16 | 1qf5 | A | GDPGUANOSINE-5'-DIPHOSPHATE | K - 18 |
PDB Site Annotated loops in this subclass |
Clusters included in this Subclass |
CLUSTER: HE.6.138 |