ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 2.4.10

Subclass Accession number: 5396
Subclass: 2.4.10

Type: HE alpha-beta
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 2.8 (>50 %)  2.8.3 (>50 %)
GO : GO:0008410 (>50 %)  GO:0016782 (>50 %)
SCOP : 100949 (>50 %)  100950 (>50 %)  74656 (>50 %)

Number of loops: 3

Average sequence ID (%) : 20.8 +/- 17.5
Average RMSD (Å) : 0.533 +/- 0.208

Consensus geometry

d (Å): 9

delta (°): 90-135

theta (°): 90-135

rho (°): 135-180

Consensus Sequence:	XXGpXp
(φψ)-conformation:	aalabb

Pattern:	[ART]	[EGR]	[CF]	[AER]	[KR]	x	[FY]	x	[AQ]	[G]	[EKY]	[LT]	[DET]	[MV]	[DE]	x
Conservation:	-0.660	-0.797	0.307	-0.660	0.889	-0.797	1.579	-1.070	-0.231	2.342	-0.592	-0.231	-0.251	0.356	0.954	-1.138

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1l1e_A_256	1l1e	A	267	282	TGCAKLFRQGYTDVDQ	HHHHHHHHTTS-EEEE	aaaaaaaaavabbbbb
1ooy_A_81	1ooy	A	81	96	AEFERQYLAGELEVEL	HHHHHHHHHTS-EEEE	aaaaaaaaavabxbbx
1poi_A_85	1poi	A	85	100	RRFRKWFEAGKLTMED	HHHHHHHHHT-SEEEE	aaaaaaaaavabxbbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1l1e_A_256	1l1e	A	CO3CARBONATE ION	V - 280

Clusters included in this Subclass

CLUSTER: HE.4.369