Logo
Information on SUBCLASS 2.5.10
Subclass Accession number: 5412
Subclass: 2.5.10 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0003955 (>75 %)  GO:0005489 (>75 %)  GO:0016651 (>75 %)  GO:0016788 (>50 %)  
SCOP : 52171 (>75 %)  52218 (>75 %)  52235 (>75 %)  
 Number of loops: 2

Average sequence ID (%) : 60.0 +/- 0.0
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: FCGFpV
(φψ)-conformation: aagppp
Pattern: x[NR][VY][FI][L][W][P][IL][Q][HS][G][IT][L][H][F][C][G][F][KQ][V]
Conservation:-1.178-0.789-0.983-0.886-0.3022.4250.867-0.6910.088-0.8860.477-1.178-0.3021.2560.4771.6460.4770.477-0.691-0.302
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d4a_A_1641d4a   A164183MNVILWPIQSGILHFCGFQVHHHHHHHHHTTTTGGGT-EEaaaaaaaaaaaaaaaagpxx
1qr2_A_1641qr2   A164183SRYFLWPLQHGTLHFCGFKVHHHHHHHHHTTTTGGGT-EEaaaaaaaaaaaaaaaagxxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1d4a_A_1641d4a   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 174
1qr2_A_1641qr2   A     ZNZINC ION W - 169
1qr2_A_1641qr2   A     ZNZINC ION Q - 172
1qr2_A_1641qr2   A     ZNZINC ION H - 173
1qr2_A_1641qr2   A     ZNZINC ION G - 174
1qr2_A_1641qr2   A     ZNZINC ION H - 177
1qr2_A_1641qr2   A     ZNZINC ION F - 178
1qr2_A_1641qr2   A     ZNZINC ION V - 183

Clusters included in this Subclass
CLUSTER: HE.8.108