Information on SUBCLASS 2.6.2 |
Subclass Accession number: 5415
Subclass: 2.6.2 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 14 Average sequence ID (%) : 15.9 +/- 17.6 Average RMSD (Å) : 0.464 +/- 0.134 Consensus geometry
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Consensus Sequence: | pXXXhX |
(φψ)-conformation: | aabpbb |
Pattern: | x | [cdehknrw] | [acfilm] | x | [AEKQR] | [dehknrsw] | x | [dekpqs] | [GLTV] | x | [acgiltv] |
Conservation: | -1.260 | -0.729 | 0.129 | 0.063 | 1.928 | -0.765 | -0.370 | -0.277 | 1.786 | -0.373 | -0.131 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bu8_A_85 | 1bu8 | A | 91 | 101 | KKMFQVEKVNC | HHHHTT--EEE | aaaaaabxbxb |
1c4x_A_51 | 1c4x | A | 52 | 62 | PDLAENFFVVA | HHHHTTSEEEE | aaaaaabxxbb |
1cqd_A_120 | 1cqd | A | 124 | 134 | QKAVANQPVSV | HHHHTTS-EEE | aaaaaabxbxb |
1ehy_A_46 | 1ehy | A | 50 | 60 | GPLAEHYDVIV | HHHHTTSEEEE | aaaaaabxxbb |
1gdh_A_13 | 1gdh | A | 17 | 27 | ARARESYDVIA | HHHHTTSEEEE | aaaaaabxxbx |
1j3v_A_18 | 1j3v | A | 18 | 28 | GHLARRFPTLV | HHHHTTS-EEE | aaaaaabwbbb |
1j7g_A_99 | 1j7g | A | 111 | 121 | QKCAEKLPVST | HHHHTTS-EEE | aaaaaabwbbb |
1kht_A_64 | 1kht | A | 79 | 89 | AEMAKESPVAV | HHHHTTS-EEE | aaaaaabxbbx |
1mvl_A_35 | 1mvl | A | 40 | 50 | HCFTEWAEVRA | HHHHTTSEEEE | aaaaaabxbbb |
1q15_A_13 | 1q15 | A | 17 | 27 | NNIQRDFDGKG | HHHHTTS-EEE | aaaaaabxebb |
1rku_A_73 | 1rku | A | 78 | 88 | DWLRERFQVVI | HHHHTTSEEEE | aaaaaabxbbx |
1vhv_A_65 | 1vhv | A | 69 | 79 | IERAKSKSVVL | HHHHTTSEEEE | aaaaaabxbbb |
1yal_*_119 | 1yal | - | 122 | 132 | LGALANQPLSV | HHHHTTS-EEE | aaaaaabxbxb |
2dap_*_71 | 2dap | - | 77 | 87 | PKFAQFACTVD | HHHHTTSEEEE | aaaaaabxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1j3v_A_18 | 1j3v | A | MSESELENOMETHIONINE | G - 18 |
1j3v_A_18 | 1j3v | A | MSESELENOMETHIONINE | H - 19 |
1j3v_A_18 | 1j3v | A | MSESELENOMETHIONINE | L - 20 |
1j3v_A_18 | 1j3v | A | MSESELENOMETHIONINE | A - 21 |
1j3v_A_18 | 1j3v | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | W - 29 |
1rku_A_73 | 1rku | A | EDO1,2-ETHANEDIOL | V - 77 |
1rku_A_73 | 1rku | A | EDO1,2-ETHANEDIOL | D - 78 |
1rku_A_73 | 1rku | A | EDO1,2-ETHANEDIOL | W - 79 |
1rku_A_73 | 1rku | A | EDO1,2-ETHANEDIOL | R - 81 |
1rku_A_73 | 1rku | A | EDO1,2-ETHANEDIOL | E - 82 |
1rku_A_73 | 1rku | A | EDO1,2-ETHANEDIOL | R - 83 |
1rku_A_73 | 1rku | A | EDO1,2-ETHANEDIOL | F - 84 |
1rku_A_73 | 1rku | A | EDO1,2-ETHANEDIOL | Q - 85 |
1rku_A_73 | 1rku | A | EDO1,2-ETHANEDIOL | D - 91 |
1vhv_A_65 | 1vhv | A | MSESELENOMETHIONINE | L - 80 |
1vhv_A_65 | 1vhv | A | MSESELENOMETHIONINE | V - 81 |
1yal_*_119 | 1yal | * | SCHS-METHYL THIOCYSTEINE GROUP | T - 119 |
1yal_*_119 | 1yal | * | SCHS-METHYL THIOCYSTEINE GROUP | S - 120 |
1yal_*_119 | 1yal | * | SCHS-METHYL THIOCYSTEINE GROUP | F - 121 |
1yal_*_119 | 1yal | * | SCHS-METHYL THIOCYSTEINE GROUP | L - 122 |
Clusters included in this Subclass |
CLUSTER: HE.3.120 |
CLUSTER: HE.4.227 |
CLUSTER: HE.4.54 |