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Information on SUBCLASS 2.6.3
Subclass Accession number: 5416
Subclass: 2.6.3 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 14.4 +/- 16.7
Average RMSD (Å) : 0.817 +/- 0.194

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: XpXPXX
(φψ)-conformation: aabpbb
Pattern: [flvw][aivy][agnv]xxx[HKNS]x[P][ILTV]x[ADPSTV]x
Conservation:-0.349-0.205-0.333-0.555-0.433-0.5400.322-0.5903.0220.344-0.385-0.298-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b16_A_2021b16   A202213VAELLLSHPTQT.HHHHHTTS--EE.aaaaaaabxbbx.
1ek9_A_2211ek9   A238250RQAQDGHLPTLDLHHHHGGGS-EEEEaaaaaaaxxbbbb
1nb2_A_591nb2   A6274LVGGATSGPVFAMHHHHHTSS--BEEaaaaaaaxpbxxb
1nsq_A_621nsq   A6577LVNYMNSGPVVPMHHHHHTSS-BEEEaaaaaaabxbbwb
1ocv_A_481ocv   A5466FYANSLKLPLAVEHHHHHTSS--EEEaaaaaaabwbbbb
1sw6_A_4051sw6   A418429WIVKKQNRPIQS.HHHHGGG--EEE.aaaaaaabxbbx.
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b16_A_2021b16   A     NAQNICOTINAMIDE ADENINE DINUCLEOTIDE 3-PENTANONE ADDUCT L - 206
1ek9_A_2211ek9   A     MSESELENOMETHIONINE D - 242
1ek9_A_2211ek9   A     MSESELENOMETHIONINE L - 245
1ek9_A_2211ek9   A     MSESELENOMETHIONINE P - 246
1ek9_A_2211ek9   A     MSESELENOMETHIONINE G - 255
1ek9_A_2211ek9   A     MSESELENOMETHIONINE I - 256
1ek9_A_2211ek9   A     MSESELENOMETHIONINE S - 257
1nsq_A_621nsq   A     PHSPHOSPHONO GROUP M - 69

Clusters included in this Subclass
CLUSTER: HE.4.316
CLUSTER: HE.5.376
CLUSTER: HE.6.176