Information on SUBCLASS 2.4.6 |
Subclass Accession number: 545
Subclass: 2.4.6 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 14.1 +/- 14.9 Average RMSD (Å) : 0.389 +/- 0.145 Consensus geometry
|
Consensus Sequence: | hXpGpX |
(φψ)-conformation: | bbllbp |
Pattern: | x | [iltvw] | x | x | [egknqs] | [DGN] | [eqrt] | [ikltv] | [ailtv] | [adg] | x | x |
Conservation: | -0.845 | -0.117 | -0.390 | -0.423 | 0.377 | 2.769 | 0.365 | -0.215 | 0.387 | -0.027 | -1.060 | -0.822 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bia_*_176 | 1bia | - | 176 | 187 | DLYLQDRKLAGI | EEEETTEEEEEE | bbbblvbxabbb |
1bol_A_179 | 1bol | A | 180 | 191 | IDCSSGTLSDVA | EEEETTEEEEEE | bbbblvbxabbb |
1ci9_A_37 | 1ci9 | A | 41 | 52 | IVARHGEILYRR | EEEETTEEEEEE | bbbblvbxabbb |
1cjw_A_81 | 1cjw | A | 83 | 94 | GWFVEGRLVAFI | EEEETTEEEEEE | bbbblvbxabbb |
1h7w_A_391 | 1h7w | A | 396 | 407 | VIVKGGRIVAVQ | EEEETTEEEEEE | bxbblvbxabbb |
1jke_A_2 | 1jke | A | 12 | 23 | SVTVEGEVTGEI | EEEETTEEEEEE | bbbbvvxxabbb |
1kmt_A_123 | 1kmt | A | 131 | 142 | HTYRKGVKIDKT | EEEETTEEEEEE | bbbblvbxabbb |
1oxc_A_13 | 1oxc | A | 29 | 40 | NVLVNNETAATF | EEEETTEEEEEE | bbbblvbxabbb |
1ut7_A_93 | 1ut7 | A | 103 | 114 | IISTEGQRVGIK | EEEETTEEEEEE | xbbblvbxabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1jke_A_2 | 1jke | A | ZNZINC ION | E - 16 |
1jke_A_2 | 1jke | A | ZNZINC ION | E - 18 |
1oxc_A_13 | 1oxc | A | FUCFUCOSE | N - 21 |
1oxc_A_13 | 1oxc | A | CACALCIUM ION | N - 21 |
1oxc_A_13 | 1oxc | A | FUCFUCOSE | S - 22 |
1oxc_A_13 | 1oxc | A | CACALCIUM ION | S - 22 |
1oxc_A_13 | 1oxc | A | FUCFUCOSE | S - 23 |
1oxc_A_13 | 1oxc | A | FUCFUCOSE | G - 24 |
1oxc_A_13 | 1oxc | A | FUCFUCOSE | Q - 26 |
1oxc_A_13 | 1oxc | A | FUCFUCOSE | T - 45 |
1ut7_A_93 | 1ut7 | A | AUGOLD ION | T - 106 |
1ut7_A_93 | 1ut7 | A | AUGOLD ION | V - 111 |
Clusters included in this Subclass |
CLUSTER: HA.3.52 |