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Information on SUBCLASS 3.2.15
Subclass Accession number: 5472
Subclass: 3.2.15 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>50 %)  
GO : GO:0008168 (>50 %)  GO:0008757 (>50 %)  GO:0016741 (>50 %)  
SCOP : 53334 (>50 %)  53335 (>50 %)  
Number of loops: 3

Average sequence ID (%) : 7.7 +/- 10.8
Average RMSD (Å) : 0.500 +/- 0.100

Consensus geometry
d (Å): 13 delta (°): 135-180 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: ppchphX
(φψ)-conformation: aalbpbb
Pattern: [ADN][ALV][AEK][KRT][KNY][DG][IV][ENR][APV]x[FGV][IL][ERT]
Conservation:-0.510-0.284-0.2840.055-0.5101.2841.9700.168-0.623-0.963-1.4151.509-0.397
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1kpg_A_821kpg   A8294AVEKYDVNVVGLTHHHHH---EEEEEaaaaalbxbbbbb
1nh8_A_1171nh8   A123135DLATKGIEATVIRHHHHHT---EEEEaaaaavbxbbxbx
1ufk_A_1551ufk   A161173NAKRNGVRPRFLEHHHHTT---EEEEaaaaavbbxxbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kpg_A_821kpg   A     MSESELENOMETHIONINE A - 82
1kpg_A_821kpg   A     MSESELENOMETHIONINE V - 83
1kpg_A_821kpg   A     MSESELENOMETHIONINE E - 84
1kpg_A_821kpg   A     MSESELENOMETHIONINE K - 85
1kpg_A_821kpg   A     MSESELENOMETHIONINE D - 87
1kpg_A_821kpg   A     MSESELENOMETHIONINE V - 88
1kpg_A_821kpg   A     MSESELENOMETHIONINE N - 89
1kpg_A_821kpg   A     MSESELENOMETHIONINE V - 90
1kpg_A_821kpg   A     MSESELENOMETHIONINE V - 91
1kpg_A_821kpg   A     MSESELENOMETHIONINE G - 92
1kpg_A_821kpg   A     MSESELENOMETHIONINE L - 93
1kpg_A_821kpg   A     SAHS-ADENOSYL-L-HOMOCYSTEINE L - 93
1kpg_A_821kpg   A     SAHS-ADENOSYL-L-HOMOCYSTEINE T - 94

Clusters included in this Subclass
CLUSTER: HE.4.297