Information on SUBCLASS 3.2.17 |
Subclass Accession number: 5474
Subclass: 3.2.17 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 12.1 +/- 12.4 Average RMSD (Å) : 0.567 +/- 0.153 Consensus geometry
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Consensus Sequence: | XXXhXXh |
(φψ)-conformation: | aalbpbb |
Pattern: | [AR] | [ALV] | [AEK] | x | [TVY] | [ADG] | [LV] | [NP] | x | [IV] | [AGP] |
Conservation: | 0.202 | -0.384 | -0.384 | -0.865 | -0.625 | -0.625 | 1.023 | 1.261 | -1.105 | 2.006 | -0.504 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1iir_A_40 | 1iir | A | 42 | 52 | RLAEVGVPHVP | HHHHTT--EEE | aaaaavbpbbx |
1k7k_A_46 | 1k7k | A | 57 | 67 | AAKVTALPAIA | HHHHHSS-EEE | aaaaavbxbbb |
1kpg_A_82 | 1kpg | A | 82 | 92 | AVEKYDVNVVG | HHHHH---EEE | aaaaalbxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1k7k_A_46 | 1k7k | A | MSESELENOMETHIONINE | V - 74 |
1kpg_A_82 | 1kpg | A | MSESELENOMETHIONINE | A - 82 |
1kpg_A_82 | 1kpg | A | MSESELENOMETHIONINE | V - 83 |
1kpg_A_82 | 1kpg | A | MSESELENOMETHIONINE | E - 84 |
1kpg_A_82 | 1kpg | A | MSESELENOMETHIONINE | K - 85 |
1kpg_A_82 | 1kpg | A | MSESELENOMETHIONINE | D - 87 |
1kpg_A_82 | 1kpg | A | MSESELENOMETHIONINE | V - 88 |
1kpg_A_82 | 1kpg | A | MSESELENOMETHIONINE | N - 89 |
1kpg_A_82 | 1kpg | A | MSESELENOMETHIONINE | V - 90 |
1kpg_A_82 | 1kpg | A | MSESELENOMETHIONINE | V - 91 |
1kpg_A_82 | 1kpg | A | MSESELENOMETHIONINE | G - 92 |
1kpg_A_82 | 1kpg | A | MSESELENOMETHIONINE | L - 93 |
1kpg_A_82 | 1kpg | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | L - 93 |
1kpg_A_82 | 1kpg | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | T - 94 |
Clusters included in this Subclass |
CLUSTER: HE.3.243 |