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Information on SUBCLASS 3.4.4
Subclass Accession number: 5490
Subclass: 3.4.4 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 15.6 +/- 22.0
Average RMSD (Å) : 0.790 +/- 0.185

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: pXXXphp
(φψ)-conformation: aabaabb
Pattern: [ailv][eknqr][dehps][FHILV][acgntv][EKRT][adegkt][fqry][DPR][DEHKNS][AFILV][adekt][CFILPVY]xx
Conservation:-0.0270.249-0.9520.751-1.0131.552-0.995-0.0561.8240.7971.105-0.722-0.724-0.571-1.218
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1brt_*_2371brt   -237251ARVFHKALPSAEYVEHHHHHHH-TTSEEEEaaaaaaabaaxxbbb
1cm7_A_2001cm7   A209223VNEIATEYPDVELAHHHHHGGG-TTSEEEEaaaaaaabaabxbbb
1cnz_A_2001cnz   A209223VNDVAKTYPDVELAHHHHHHTT-TTSEEEEaaaaaaabaabxbbb
1doz_A_541doz   A6882EQHLNEIQDEITFKAHHHHHHH-SSEEEEEaaaaaaabaabbbbx
1fp2_A_2011fp2   A203217AKIICETFPKLKCIVHHHHHHH-TT-EEEEaaaaaaabaaxxbbx
1g8a_A_1081g8a   A114128LVPIVEERRNIVPILHHHHHSS-TTEEEEEaaaaaaaxaabbwbx
1j98_A_501j98   A6478IRSHAEKYDHFDIIDHHHHHTT-SSEEEEEaaaaaaaxaabbxab
1o6b_A_481o6b   A5569LREVTKDIPNITVETHHHHHTT-TTEEEEEaaaaaaaxaabbxbb
1pry_A_1081pry   A114128LVPIVEERRNIIPILHHHHHTT-TTEEEEEaaaaaaaxaabbwbx
1xaa_*_1901xaa   -199213VEEVGRGYPDVALEHHHHHHTT-TTSEEEEaaaaaaabaabxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fp2_A_2011fp2   A     SAHS-ADENOSYL-L-HOMOCYSTEINE T - 202
1fp2_A_2011fp2   A     SAHS-ADENOSYL-L-HOMOCYSTEINE F - 218
1fp2_A_2011fp2   A     SAHS-ADENOSYL-L-HOMOCYSTEINE D - 219
1j98_A_501j98   A     ZNZINC ION H - 54
1j98_A_501j98   A     ZNZINC ION E - 57
1j98_A_501j98   A     ZNZINC ION H - 58

Clusters included in this Subclass
CLUSTER: HE.4.130
CLUSTER: HE.6.56