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Information on SUBCLASS 3.4.13
Subclass Accession number: 5499
Subclass: 3.4.13 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 5.6 +/- 8.1
Average RMSD (Å) : 0.767 +/- 0.252

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: pXXXXhp
(φψ)-conformation: aabaapb
Pattern: [AL]x[DER][AIL][AEG][EQS]x[AFI]x[QRS]x[NSV][EKP]x[FGV][KRT][IKV]x
Conservation:1.064-1.0571.1040.383-0.1571.464-1.057-0.337-1.4180.7441.089-0.6970.924-1.418-1.4180.924-0.1570.020
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1j8m_F_2281j8m   F228245AYDLASKFNQASKIGTIIHHHHHHHHHHT-TTEEEEaaaaaaaaaaabaaxbbb
1nwc_A_2911nwc   A291308LEEIEQIIASHNEWVKVIHHHHHHHHHHS-SSEEEEaaaaaaaaaaabaaxbxx
1v8f_A_2151v8f   A218235ALRAGEEALRAVPEFRKDHHHHHHHHHTT-TT-EEEaaaaaaaaaaabaaxbxa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1v8f_A_2151v8f   A     GOLGLYCEROL V - 215
1v8f_A_2151v8f   A     GOLGLYCEROL A - 216
1v8f_A_2151v8f   A     GOLGLYCEROL E - 217

Clusters included in this Subclass
CLUSTER: HE.3.130
CLUSTER: HE.5.253