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Information on SUBCLASS 3.6.5
Subclass Accession number: 5514
Subclass: 3.6.5 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 9.8 +/- 11.7
Average RMSD (Å) : 0.843 +/- 0.172

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXXpXXX
(φψ)-conformation: aapaabb
Pattern: xx[lmv]x[ADEQRS]x[ilv]x[agns][ael][EKRST][dgnrt]x[itv]x
Conservation:-0.659-0.4410.888-0.8360.831-0.7591.544-1.2250.426-0.2711.503-0.393-0.8171.404-1.194
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1byr_A_141byr   A1731VLVLSAIDSAKTSIRHHHHHHHHH-SSEEEaaaaaaaaaxaabbb
1cs1_A_3081cs1   A309323QTLRRFLGGLSLFTLHHHHHHHHT-SSSEEaaaaaaaaaxNabxx
1dnp_A_1071dnp   A111125ARDVEVERALRNVVCHHHHHHHHH-TTSEEaaaaaaaaaxaabxb
1f0i_A_3211f0i   A324338SALRALVASAKGHIEHHHHHHHHT-SSEEEaaaaaaaaaxaabbb
1f0i_A_651f0i   A7286AKMTENIGNATRTVDHHHHHHHHT-SSEEEaaaaaaaaaxaabbb
1qgv_A_111qgv   A1226WQVDQAILSEEDRVVHHHHHHHHT-SSSEEaaaaaaaaabaabxb
1zpd_A_301zpd   A3044LVLLDNLLLNKNMEQHHHHHHHHT-TTSEEaaaaaaaaaxaabbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dnp_A_1071dnp   A     MHF5,10-METHENYL-6,7,8-TRIHYDROFOLIC ACID V - 107
1dnp_A_1071dnp   A     MHF5,10-METHENYL-6,7,8-TRIHYDROFOLIC ACID N - 108
1dnp_A_1071dnp   A     MHF5,10-METHENYL-6,7,8-TRIHYDROFOLIC ACID E - 109
1f0i_A_651f0i   A     PO4PHOSPHATE ION L - 90

Clusters included in this Subclass
CLUSTER: HE.4.138
CLUSTER: HE.5.117