Information on SUBCLASS 3.6.9 |
Subclass Accession number: 5518
Subclass: 3.6.9 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 11.1 +/- 14.2 Average RMSD (Å) : 0.800 +/- 0.000 Consensus geometry
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Consensus Sequence: | XpXXphX |
(φψ)-conformation: | aapaabb |
Pattern: | [LPV] | [AL] | x | [ADE] | [AKR] | [AV] | x | [QRS] | x | [KPS] | [NS] | [AV] | [ADR] | [AIV] | [FIL] |
Conservation: | -0.972 | 0.228 | -0.196 | -0.121 | 0.020 | 0.810 | -1.114 | 0.020 | -1.398 | -0.263 | 2.513 | 0.837 | -1.256 | 0.304 | 0.588 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dnp_A_17 | 1dnp | A | 17 | 31 | LALAAACRNSSARVL | HHHHHHSSSTTSEEE | aaaaaaaaxaaxxbb |
1hyu_A_394 | 1hyu | A | 395 | 409 | VLQDKVRSLKNVDII | HHHHHHTT-TTEEEE | aaaaaaaaxaabbbb |
2oat_A_212 | 2oat | A | 213 | 227 | PALERALQDPNVAAF | HHHHHHTTSTTEEEE | aaaaaaaaxaaxabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
2oat_A_212 | 2oat | A | PFM1-AMINO-7-(2-METHYL-3-OXIDO-5-((PHOSPHONOXY)METHYL)-4-PYRIDOXAL-5-OXO-6-HEPTENATE | M - 228 |
Clusters included in this Subclass |
CLUSTER: HE.6.248 |