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Information on SUBCLASS 3.6.9
Subclass Accession number: 5518
Subclass: 3.6.9 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 11.1 +/- 14.2
Average RMSD (Å) : 0.800 +/- 0.000

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XpXXphX
(φψ)-conformation: aapaabb
Pattern: [LPV][AL]x[ADE][AKR][AV]x[QRS]x[KPS][NS][AV][ADR][AIV][FIL]
Conservation:-0.9720.228-0.196-0.1210.0200.810-1.1140.020-1.398-0.2632.5130.837-1.2560.3040.588
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dnp_A_171dnp   A1731LALAAACRNSSARVLHHHHHHSSSTTSEEEaaaaaaaaxaaxxbb
1hyu_A_3941hyu   A395409VLQDKVRSLKNVDIIHHHHHHTT-TTEEEEaaaaaaaaxaabbbb
2oat_A_2122oat   A213227PALERALQDPNVAAFHHHHHHTTSTTEEEEaaaaaaaaxaaxabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
2oat_A_2122oat   A     PFM1-AMINO-7-(2-METHYL-3-OXIDO-5-((PHOSPHONOXY)METHYL)-4-PYRIDOXAL-5-OXO-6-HEPTENATE M - 228

Clusters included in this Subclass
CLUSTER: HE.6.248