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Information on SUBCLASS 3.12.2
Subclass Accession number: 5540
Subclass: 3.12.2 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.5 (>75 %)  2.5.1 (>75 %)  
GO : GO:0016765 (>75 %)  GO:0016874 (>75 %)  
SCOP : 52373 (>75 %)  52374 (>75 %)  52375 (>75 %)  55199 (>75 %)  55205 (>75 %)  55209 (>75 %)  
Number of loops: 6

Average sequence ID (%) : 15.8 +/- 19.0
Average RMSD (Å) : 0.700 +/- 0.358

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: ppXphph
(φψ)-conformation: aabppbb
Pattern: [deqs][agkl][fil][dehkr][DEKR][AIL][AILV][HKNS][AEKT][aer][EKPQR][ILV][DEKRT][FILY][HQWY][aclw]
Conservation:-0.561-1.599-0.267-1.1870.9490.8400.4870.314-0.137-1.0620.2561.921-0.4340.5271.268-1.316
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bx4_A_461bx4   A4762ELFDELVKKFKVEYHAHHHHHHHHHS--EEEEaaaaaaaaabxbbbbx
1gkm_A_121gkm   A1227LAQLRAIHAAPVRLQLHHHHHHHHHS--EEEEaaaaaaaaabpbbbbx
1jil_A_211jil   A2237QGIEDLLNKEQVTLYCHHHHHHHHHS--EEEEaaaaaaaaabxbbbbb
1n3l_A_241n3l   A2540EKLKEILKERELKIYWHHHHHHHTTS--EEEEaaaaaaaaabxxbbbb
1nsa_*_201nsa   -2439SELHELASTRQIDFWKHHHHHHHHHS--EEEEaaaaaaaaabxxxxab
2ts1_*_192ts1   -2035DGLRKLLNEERVTLYCHHHHHHHHHS--EEEEaaaaaaaaabxxxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bx4_A_461bx4   A     ADNADENOSINE A - 62
1bx4_A_461bx4   A     ADNADENOSINE G - 63
1jil_A_211jil   A     485[2-AMINO-3-(4-HYDROXY-PHENYL)-PROPIONYLAMINO]- (3,4,5-TRIHYDROXY-6-METHYL-TETRAHYDRO-PYRAN-2-YL)- ACETIC ACID Y - 36
1jil_A_211jil   A     485[2-AMINO-3-(4-HYDROXY-PHENYL)-PROPIONYLAMINO]- (3,4,5-TRIHYDROXY-6-METHYL-TETRAHYDRO-PYRAN-2-YL)- ACETIC ACID C - 37
1jil_A_211jil   A     485[2-AMINO-3-(4-HYDROXY-PHENYL)-PROPIONYLAMINO]- (3,4,5-TRIHYDROXY-6-METHYL-TETRAHYDRO-PYRAN-2-YL)- ACETIC ACID G - 38
1jil_A_211jil   A     485[2-AMINO-3-(4-HYDROXY-PHENYL)-PROPIONYLAMINO]- (3,4,5-TRIHYDROXY-6-METHYL-TETRAHYDRO-PYRAN-2-YL)- ACETIC ACID A - 39
1nsa_*_201nsa   *     BENBENZAMIDINE R - 33

Clusters included in this Subclass
CLUSTER: HE.4.109