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Information on SUBCLASS 3.18.1
Subclass Accession number: 5557
Subclass: 3.18.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 36.5 +/- 30.7
Average RMSD (Å) : 0.480 +/- 0.179

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: pScXphX
(φψ)-conformation: aallabb
Pattern: x[AKQR][EK][CG]x[AQ][RW][SV][gqr]x[S][EGK][GQ][kns][IVY][AET][CY]xx[AE]
Conservation:-0.631-0.3521.0771.223-1.001-0.0521.828-0.309-1.597-0.9511.629-0.4850.524-0.9690.129-0.3911.623-0.861-0.5240.090
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cb6_A_13521cb6   A13551374LRKCNQWSGLSEGSVTCSSAHHHHHHHHHHTTTSEEEEEEaaaaaaaaaaalvabbbbbb
1ce2_A_3521ce2   A355374QKKCQQWSQQSGQIVTCATAHHHHHHHHHHHTSSEEEEEEaaaaaaaaaaagvaxbbbbb
1h76_A_3521h76   A356375TQKCDAWSINSGGKIECVSAHHHHHHHHHHTTTSEEEEEEaaaaaaaaaaavvabbbbbb
1mqi_A_1741mqi   A174193TAEGVARVRKSKGKYAYLLEHHHHHHHHHHTTTSEEEEEEaaaaaaaaaaalvabbbxbx
1nkx_A_3521nkx   A355374QKKCQQWSQQSGQNVTCATAHHHHHHHHHHTTTSEEEEEEaaaaaaaaaaavvabbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1mqi_A_1741mqi   A     FWD2-AMINO-3-(5-FLUORO-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN -1-YL)-PROPIONIC ACID T - 174
1mqi_A_1741mqi   A     FWD2-AMINO-3-(5-FLUORO-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN -1-YL)-PROPIONIC ACID Y - 190
1mqi_A_1741mqi   A     FWD2-AMINO-3-(5-FLUORO-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN -1-YL)-PROPIONIC ACID L - 191
1mqi_A_1741mqi   A     FWD2-AMINO-3-(5-FLUORO-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN -1-YL)-PROPIONIC ACID L - 192
1mqi_A_1741mqi   A     FWD2-AMINO-3-(5-FLUORO-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN -1-YL)-PROPIONIC ACID E - 193
1nkx_A_3521nkx   A     NAGN-ACETYL-D-GLUCOSAMINE Q - 364
1nkx_A_3521nkx   A     NAGN-ACETYL-D-GLUCOSAMINE S - 365
1nkx_A_3521nkx   A     NAGN-ACETYL-D-GLUCOSAMINE G - 366
1nkx_A_3521nkx   A     NAGN-ACETYL-D-GLUCOSAMINE N - 368

Clusters included in this Subclass
CLUSTER: HE.3.155