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Information on SUBCLASS 3.28.2
Subclass Accession number: 5572
Subclass: 3.28.2 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 22.2 +/- 16.4
Average RMSD (Å) : 0.633 +/- 0.058

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXXIPXX
(φψ)-conformation: aalpwbb
Pattern: x[AS][FIL]xx[AGY][LV]xx[ATV][GS][I][P]xx
Conservation:-0.9820.3860.028-0.793-0.730-0.6660.377-0.666-0.540-0.2880.6031.1632.867-0.162-0.597
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1auv_A_1991auv   A199213RSLVIGLQYAGIPSIHHHHHHHHHTT--EEaaaaaaaaaavxwbb
1uqr_A_831uqr   A8397VAIRDALLAVSIPFIHHHHHHHHHHT--EEaaaaaaaaaalbwbb
3tgl_*_1823tgl   -182196PAFANYVVSTGIPYRHHHHHHHHHT---EEaaaaaaaaaavpwbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1uqr_A_831uqr   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL V - 83

Clusters included in this Subclass
CLUSTER: HE.3.249