Information on SUBCLASS 3.35.1 |
Subclass Accession number: 5581
Subclass: 3.35.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 20.6 +/- 16.7 Average RMSD (Å) : 0.425 +/- 0.096 Consensus geometry
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Consensus Sequence: | XXXPGXX |
(φψ)-conformation: | aabpgbb |
Pattern: | [ACNS] | x | [AGVW] | [AIV] | [ANR] | x | x | [ITV] | x | [AKR] | x | [P] | [G] | x | [ILTY] | [GNS] | x |
Conservation: | -0.341 | -0.360 | -0.728 | 0.010 | -0.355 | -0.696 | -0.516 | 0.217 | -0.335 | -0.119 | -0.632 | 2.787 | 2.271 | -0.470 | -0.438 | 0.298 | -0.591 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ixh_*_176 | 1ixh | - | 177 | 193 | NDGIAAFVQRLPGAIGY | HHHHHHHHHHSTTEEEE | aaaaaaaaaabpvxbbx |
1ly1_A_15 | 1ly1 | A | 16 | 32 | STWAREFIAKNPGFYNI | HHHHHHHHHHSTTEEEE | aaaaaaaaaabpgbbxb |
1qoz_A_23 | 1qoz | A | 23 | 39 | ATVVNLVIQAHPGTTSE | HHHHHHHHHHSTTEEEE | aaaaaaaaaabxvbbbb |
1usl_A_47 | 1usl | A | 50 | 66 | CIAAATRTVADPGSLGI | HHHHHHHHHTSTT-EEE | aaaaaaaaaabpvxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ixh_*_176 | 1ixh | * | PO4PHOSPHATE ION | G - 176 |
1ixh_*_176 | 1ixh | * | PO4PHOSPHATE ION | N - 177 |
1ixh_*_176 | 1ixh | * | PO4PHOSPHATE ION | Y - 193 |
1ixh_*_176 | 1ixh | * | PO4PHOSPHATE ION | E - 195 |
1qoz_A_23 | 1qoz | A | NAGN-ACETYL-D-GLUCOSAMINE | S - 38 |
Clusters included in this Subclass |
CLUSTER: HE.4.279 |