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Information on SUBCLASS 4.3.10
Subclass Accession number: 5613
Subclass: 4.3.10 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>75 %)  
SCOP : 52373 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 9.3 +/- 10.9
Average RMSD (Å) : 1.075 +/- 0.499

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: pXXXpXhh
(φψ)-conformation: aapabpbp
Pattern: x[EKRW]xx[AFM]x[AIL][AKRS][EH]xx[DP]xxxxxx
Conservation:-0.5690.053-0.169-0.5290.514-0.4640.7880.3122.528-0.917-0.4642.013-0.658-0.9820.651-0.982-0.917-0.206
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ez0_A_2311ez0   A234251GRALFNLAHERPEPIPFYHHHHHHHHHHSSS---EEaaaaaaaaaaxabpbpbb
1j1u_A_1741j1u   A174191RKIHMLARELLPKKVVCIHHHHHHHHHHSSS--EEEaaaaaaaaaaxabxxxbb
1nth_A_3091nth   A316333GWACATISEFTDILSGNQHHHHHHHHHH----EEEEaaaaaaaaaabaxxbbbb
1o97_C_371o97   C4360LEEAMKIKESSDTDVEVVHHHHHHHHHH-SS--EEEaaaaaaaaaaxaxxbxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ez0_A_2311ez0   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 231
1ez0_A_2311ez0   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 232
1ez0_A_2311ez0   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 233
1ez0_A_2311ez0   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 234
1ez0_A_2311ez0   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 236
1ez0_A_2311ez0   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 237
1ez0_A_2311ez0   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE E - 253
1j1u_A_1741j1u   A     TYRTYROSINE I - 176
1nth_A_3091nth   A     BGX4-METHYL-PYRROLINE-5-CARBOXYLIC ACID Q - 333
1o97_C_371o97   C     FADFLAVIN-ADENINE DINUCLEOTIDE E - 37
1o97_C_371o97   C     AMPADENOSINE MONOPHOSPHATE W - 38
1o97_C_371o97   C     FADFLAVIN-ADENINE DINUCLEOTIDE W - 38
1o97_C_371o97   C     AMPADENOSINE MONOPHOSPHATE D - 39
1o97_C_371o97   C     AMPADENOSINE MONOPHOSPHATE S - 42
1o97_C_371o97   C     AMPADENOSINE MONOPHOSPHATE V - 62
1o97_C_371o97   C     AMPADENOSINE MONOPHOSPHATE S - 63
1o97_C_371o97   C     AMPADENOSINE MONOPHOSPHATE V - 64
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o97_C_371o97   C FADFAD BINDING SITE FOR CHAIN DW - 38
1o97_C_371o97   C AMPAMP BINDING SITE FOR CHAIN CD - 39
1o97_C_371o97   C AMPAMP BINDING SITE FOR CHAIN CS - 63

Clusters included in this Subclass
CLUSTER: HE.5.272