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Information on SUBCLASS 4.4.4
Subclass Accession number: 5619
Subclass: 4.4.4 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 29.3 +/- 22.9
Average RMSD (Å) : 0.371 +/- 0.250

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXGXhpXh
(φψ)-conformation: aagababb
Pattern: [aw][ilv][AGN][dhqsy][AIT]x[ADNR][IKLM][IV][AEGKQR]x[G]x[AIV][ADKQ][AIKLTV][AGMV][ILV][ACIV][GLVY][GS]
Conservation:-0.441-0.0450.241-0.6730.072-1.041-0.2920.1041.389-0.445-1.1512.933-1.1250.249-0.007-0.747-0.4080.754-0.020-0.9421.595
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1afw_A_1271afw   A131151AVNDIANKIKVGQIDIGLALGHHHHHHHHHHTTS-SEEEEEEaaaaaaaaaaavababbbbbb
1e5m_A_1691e5m   A173193AIGDAFRLVQNGYAKAMICGGHHHHHHHHHHTTS-SEEEEEEaaaaaaaaaaavababbxbeb
1hzp_A_1141hzp   A118138ALGAAADMIRGGGAATMLVVGHHHHHHHHHHTTS-SEEEEEEaaaaaaaaaaavababbbbbx
1j3n_A_1631j3n   A167187ALGSALRMIQLGEADLVLAGGHHHHHHHHHHTTS-SEEEEEEaaaaaaaaaaavababbxbeb
1kas_*_1651kas   -169189NIGHAARIIAYGDADVMVAGGHHHHHHHHHHHTS-SEEEEEEaaaaaaaaaaagababbxbeb
1ub7_A_1121ub7   A116136ALAQAHALVEAGLAQKVLAVGHHHHHHHHHHTTS-SEEEEEEaaaaaaaaaaavababbxbbb
1ypr_A_21ypr   A222WQAYTDNLIGTGKVDKAVIYSHHHHHHHHHHTSS-SEEEEEEaaaaaaaaaaavababbbbxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1hzp_A_1141hzp   A     GOLGLYCEROL K - 141
1ub7_A_1121ub7   A     CEAS-HYDROXY-CYSTEINE G - 112
1ub7_A_1121ub7   A     CEAS-HYDROXY-CYSTEINE W - 113
1ub7_A_1121ub7   A     CEAS-HYDROXY-CYSTEINE I - 114
1ub7_A_1121ub7   A     GOLGLYCEROL H - 121
1ub7_A_1121ub7   A     GOLGLYCEROL E - 125
1ub7_A_1121ub7   A     GOLGLYCEROL G - 127
1ub7_A_1121ub7   A     GOLGLYCEROL L - 128
1ub7_A_1121ub7   A     GOLGLYCEROL A - 129
1ub7_A_1121ub7   A     CEAS-HYDROXY-CYSTEINE E - 138

Clusters included in this Subclass
CLUSTER: HE.4.144