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Information on SUBCLASS 4.5.2
Subclass Accession number: 5621
Subclass: 4.5.2 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 9.2 +/- 12.7
Average RMSD (Å) : 0.771 +/- 0.221

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XXXXXXhX
(φψ)-conformation: aalbppbb
Pattern: x[dkswy][eflm][AFIKL][aer]x[DEGNS][fhi][DEGNPT][ilptv][FIPVY]xx
Conservation:0.077-1.223-0.030-0.6710.932-0.3072.365-0.6620.196-0.3910.812-1.098-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1azs_A_5521azs   A552564AYLKEHSIETFLIHHHHHTT---EEEaaaaaalxxbbbx
1l8r_A_2261l8r   A231242TKLKRLEITPVV.HHHHHTT---EE.aaaaaavbbxxx.
1mhy_D_4041mhy   D406417QWLLANGHDVYI.HHHHHTT---EE.aaaaaavbxbbb.
1mty_D_4051mty   D406417MWFIENNHPIYI.HHHHHTT---EE.aaaaaalbxbbb.
1np3_A_1341np3   A137149RSEFVKGGGIPDLHHHHHTT----EEaaaaaavbbxpbx
1pkx_A_821pkx   A8698ADMARLDFNLIRVHHHHHHT---EEEaaaaaalbxxbab
1rty_B_1471rty   B166177VVNARSGIGDVE.HHHHHTT---EE.aaaaaavbxxxb.
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1pkx_A_821pkx   A     XMPXANTHOSINE-5'-MONOPHOSPHATE C - 101
1rty_B_1471rty   B     MSESELENOMETHIONINE E - 147
1rty_B_1471rty   B     MSESELENOMETHIONINE L - 150
1rty_B_1471rty   B     MSESELENOMETHIONINE F - 161

Clusters included in this Subclass
CLUSTER: HE.4.179
CLUSTER: HE.5.97