Information on SUBCLASS 2.5.7 |
Subclass Accession number: 563
Subclass: 2.5.7 ![]() Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() Conserved Annotation EC : - (>75 %) GO : GO:0003677 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 15.2 +/- 14.1 Average RMSD (Å) : 0.800 +/- 0.300 Consensus geometry
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Consensus Sequence: | XXpGXX |
(φψ)-conformation: | bbplbp |
Pattern: | [FLY] | x | x | x | [EHK] | [G] | x | x | [DGT] | [KV] | [AFV] |
Conservation: | 0.468 | -0.613 | -1.154 | 0.079 | 0.266 | 2.699 | -0.343 | -0.546 | -0.343 | -0.104 | -0.410 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ako_*_53 | 1ako | - | 56 | 66 | YHGQKGHYGVA | EEEETTEEEEE | bbbbpvbeebb |
1c9o_A_15 | 1c9o | A | 17 | 27 | FIEVEGGSDVF | EEEETTEEEEE | bxxbxvbxxbx |
1hw1_A_61 | 1hw1 | A | 61 | 71 | LTIQHGKPTKV | EEEETTEEEEE | bbbbpvbpxxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1c9o_A_15 | 1c9o | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | Y - 15 |
Clusters included in this Subclass |
CLUSTER: HA.1.80 |