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Information on SUBCLASS 4.7.3
Subclass Accession number: 5630
Subclass: 4.7.3 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0008168 (>75 %)  GO:0008757 (>75 %)  GO:0016741 (>75 %)  
SCOP : 53334 (>75 %)  53335 (>75 %)  
 Number of loops: 6

Average sequence ID (%) : 16.0 +/- 22.0
Average RMSD (Å) : 0.817 +/- 0.337

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XhXhXphX
(φψ)-conformation: aalpaabb
Pattern: xxxx[eqrs][ars]x[GR][adgv]xx[CGSV]x[FLVW]x
Conservation:-0.853-0.0360.229-0.849-0.086-0.151-0.3822.077-0.891-0.6451.550-0.651-0.0761.737-0.974
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dl5_A_1101dl5   A117131KRNVERLGIENVIFVHHHHHHTT--SEEEEaaaaaaavxaabbxb
1ixk_A_1531ixk   A160174RLNLSRLGVLNVILFHHHHHHHT--SEEEEaaaaaaavxaabbbb
1jg1_A_1241jg1   A131145KRNLERAGVKNVHVIHHHHHHTT--SEEEEaaaaaaavxaaxbxb
1k0g_A_2261k0g   A231245LQLNQANRAPFSAFLHHHHHHH--TTEEEEaaaaaaalxaaxbbb
1olz_A_4881olz   A488502CEDCVLARDPYCAWSHHHHHHTT-TTEEEEaaaaaaalbaabbxb
1r88_A_2461r88   A257271YNQYRSVGGHNGHFDHHHHHHTT--SEEEEaaaaaaavxaabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dl5_A_1101dl5   A     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 112
1ixk_A_1531ixk   A     MSESELENOMETHIONINE N - 170
1jg1_A_1241jg1   A     SAHS-ADENOSYL-L-HOMOCYSTEINE L - 126
1k0g_A_2261k0g   A     TRPTRYPTOPHAN A - 239
1k0g_A_2261k0g   A     TRPTRYPTOPHAN P - 240
1k0g_A_2261k0g   A     TRPTRYPTOPHAN F - 241
1k0g_A_2261k0g   A     TRPTRYPTOPHAN S - 242
1k0g_A_2261k0g   A     TRPTRYPTOPHAN A - 243

Clusters included in this Subclass
CLUSTER: HE.4.166
CLUSTER: HE.6.260