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Information on SUBCLASS 4.8.2
Subclass Accession number: 5633
Subclass: 4.8.2 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 15.8 +/- 15.5
Average RMSD (Å) : 1.000 +/- 0.381

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: pphphpXh
(φψ)-conformation: aabppabb
Pattern: x[aes][FLV]x[ERS][adkt][GLVY][DPQR][CIV][DHS][ATV][ITV]
Conservation:-1.451-0.4230.584-1.3290.691-0.961-0.932-0.1441.1961.0230.4761.271
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c1d_A_2461c1d   A246257TEVARTLDCSVVHHHHHH---SEEaaaaaapbbabb
1cli_B_12301cli   B12341245LELIEKVDVHAIHHHHHHS---EEaaaaaabxxabb
1gy8_A_791gy8   A8495GVFTRHGPIDAVHHHHHS----EEaaaaaaxwxabb
1jxh_A_571jxh   A6576DSVFSDVRIDTTHHHHTTS--SEEaaaaaabxbabb
2ak3_A_942ak3   A98109EALDRAYQIDTVHHHHTT----EEaaaaaabxxabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gy8_A_791gy8   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE H - 97
2ak3_A_942ak3   A     AMPADENOSINE MONOPHOSPHATE Q - 96

Clusters included in this Subclass
CLUSTER: HE.5.188