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Information on SUBCLASS 4.13.2
Subclass Accession number: 5655
Subclass: 4.13.2 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004553 (>75 %)  GO:0016798 (>75 %)  
SCOP : 51988 (>75 %)  51989 (>75 %)  51990 (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 25.0 +/- 22.4
Average RMSD (Å) : 0.520 +/- 0.110

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: QLpXXpXX
(φψ)-conformation: aapbaabb
Pattern: x[AE][acfl][ITV]x[RTY][av][ILMV][EKST][AQ][L][dknq][AKLT][PS][HKN][ITV][alt][FLMV][sy][ALM]
Conservation:-0.8451.026-1.6150.585-1.249-0.218-0.4040.752-0.1731.0262.274-1.175-1.0790.8760.8740.320-1.1740.148-0.2120.265
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dys_A_1501dys   A160179QEAIGYAISQLQASHIHLYLHHHHHHHHHH--BTTEEEEEaaaaaaaaaaaxbaabbxbx
1mf7_A_1471mf7   A154173KEFVSTVMEQLKKSKTLFSLHHHHHHHHHHH--TTEEEEEaaaaaaaaaaaxbaabbbbb
1oc7_A_2381oc7   A248267RELTIYALKQLDLPHVAMYMHHHHHHHHHHT--TTEEEEEaaaaaaaaaaaxbaabbbbx
1qjw_A_2391qjw   A243262LECINYAVTQLNLPNVAMYLHHHHHHHHHHT--TTEEEEEaaaaaaaaaaaxbaabbbbx
1zpd_A_3671zpd   A367386NAEIARQVEALLTPNTTVIAHHHHHHHHHHT--TTEEEEEaaaaaaaaaaaxbaaxbbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1qjw_A_2391qjw   A     NAGN-ACETYL-D-GLUCOSAMINE Q - 239
1qjw_A_2391qjw   A     NAGN-ACETYL-D-GLUCOSAMINE S - 240
1qjw_A_2391qjw   A     NAGN-ACETYL-D-GLUCOSAMINE L - 243
1qjw_A_2391qjw   A     NAGN-ACETYL-D-GLUCOSAMINE E - 244
1qjw_A_2391qjw   A     NAGN-ACETYL-D-GLUCOSAMINE N - 247
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1dys_A_1501dys   A CIAPOTENTIAL ENDOGLUCANASE ACTIVE SITE FOR CHAIN A THIS IS AN ENDOGLUCANASE, DEPITE THE HIGHER SEQUENCE AND STRUCTURAL SIMILARITY TO CELLOBIOHYDROLASES IN THIS SEQUENCE FAMILY. THE IDENTIFICATION OF BASE AND PKA MODULATOR ARE A MATTER OF CONTROVERSY.D - 180
1oc7_A_2381oc7   A MODPKA MODULATOR.D - 268

Clusters included in this Subclass
CLUSTER: HE.5.189