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Information on SUBCLASS 2.8.1
Subclass Accession number: 567
Subclass: 2.8.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.2 (>75 %)  1.2.1 (>75 %)  1.2.1.2
GO : GO:0008863 (>75 %)  GO:0016620 (>75 %)  GO:0016903 (>75 %)  GO:0030151 (>75 %)  GO:0046914 (>75 %)  
SCOP : 53705 (>75 %)  53706 (>75 %)  53707 (>75 %)  
 Number of loops: 8

Average sequence ID (%) : 8.9 +/- 11.9
Average RMSD (Å) : 0.388 +/- 0.136

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXXppX
(φψ)-conformation: bbFabb
Pattern: [iltv]x[gst][adekt]xxxx
Conservation:0.917-0.0571.4830.543-0.927-1.334-0.9550.330
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bob_*_181bob   -2330IVGENAVQEESSSEEEbbFabxbx
1bu6_O_2601bu6   O264271TYGTGCFMEESSSEEEbbFabbbx
1jov_A_1211jov   A128135VFTDKCHLEESSSEEEbbFabbbb
1k6w_A_4121k6w   A414421VYLEQPEAEESSSEEEbbFabxbx
1mo9_A_3891mo9   A391398LHTHYEVSEESSSEEEbbFabxbb
1n7v_A_4251n7v   A425432DKTTLLEIEESSSEEEbbFabxbb
1q2b_A_961q2b   A97104TQSAQKNVEESSSEEEbbFabxbb
1r0v_A_861r0v   A8794LLTKKPYLEESSSEEEbbFabxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bu6_O_2601bu6   O     GOLGLYCEROL T - 267
1bu6_O_2601bu6   O     GOLGLYCEROL G - 268
1bu6_O_2601bu6   O     GOLGLYCEROL F - 270
1mo9_A_3891mo9   A     FADFLAVIN-ADENINE DINUCLEOTIDE F - 390
1mo9_A_3891mo9   A     FADFLAVIN-ADENINE DINUCLEOTIDE H - 392
1n7v_A_4251n7v   A     CACALCIUM ION D - 425
1n7v_A_4251n7v   A     CACALCIUM ION K - 426
1n7v_A_4251n7v   A     CACALCIUM ION T - 427

Clusters included in this Subclass
CLUSTER: HA.4.56