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Information on SUBCLASS 4.25.1
Subclass Accession number: 5673
Subclass: 4.25.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 20.9 +/- 26.0
Average RMSD (Å) : 0.700 +/- 0.170

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: hhpchpXh
(φψ)-conformation: aaplpabb
Pattern: [GILP]x[aeknrst][aimv][AFLV][EGKRS][DG][acvy][ADNS]x[AIVY][HLVY][ilt]
Conservation:-0.928-1.042-0.662-0.1800.2850.2832.426-0.5711.243-1.1650.2230.401-0.314
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b8p_A_771b8p   A7789PMTAFKDADVALLHHHHTTT-SEEEEaaaaaplxabbbx
1dxh_A_2181dxh   A218230PKEAVKGVDFVHTHHHHTTT-SEEEEaaaaaxvxabbbb
1iir_A_691iir   A8799IPAAAEGCAAVVTHHHHTTT-SEEEEaaaaaxvbabbbb
1iz9_A_741iz9   A7486PKVAFKDADYALLHHHHTTT-SEEEEaaaaaplxabbbx
1lts_A_661lts   A7385GQSILSGYSTYYIHHHHSTT-SEEEEaaaaaxvpabbbb
1pvv_A_2161pvv   A216228PVKAVKDADVIYTHHHHTTT-SEEEEaaaaaxvxabbbb
1r6d_A_671r6d   A7082LARELRGVDAIVHHHHHTTT--EEEEaaaaapvxabbbb
1s5d_A_661s5d   A7385GQTILSGHSTYYIHHHHSTT-SEEEEaaaaaxvxabbbb
1tii_A_641tii   A7183GQNMLGGYNEYYIHHHHSTT-SEEEEaaaaaxgxabbbb
7mdh_A_1167mdh   A116128PYEVFEDVDWALLHHHHTTT-SEEEEaaaaaxvxabbxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1iir_A_691iir   A     MGMAGNESIUM ION T - 82
1iir_A_691iir   A     MGMAGNESIUM ION D - 85
1iir_A_691iir   A     MGMAGNESIUM ION E - 86
1r6d_A_671r6d   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE H - 82
7mdh_A_1167mdh   A     ZNZINC ION E - 118
7mdh_A_1167mdh   A     ZNZINC ION E - 121

Clusters included in this Subclass
CLUSTER: HE.4.80