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Information on SUBCLASS 4.36.1
Subclass Accession number: 5692
Subclass: 4.36.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 22.0 +/- 24.7
Average RMSD (Å) : 0.740 +/- 0.230

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XhpLchhh
(φψ)-conformation: aalalpbb
Pattern: [AP][AP][agl]x[GTV][AL][ADR][AIV]xx[AEKQ]x[AEL][egnr][LT][GKQ]x[alv][ACLY]x
Conservation:2.2091.786-1.095-0.541-0.4570.801-0.3760.970-0.784-0.8070.250-0.463-0.266-0.2631.5960.679-0.821-0.712-0.553-1.152
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a05_A_131a05   A1938AARQVLDAVDQAAHLGLRCTHHHHHHHHHHHHHT---EEEaaaaaaaaaaaaavavxbbb
1trb_*_151trb   -1534PAGYTAAVYAARANLQPVLIHHHHHHHHHHHTTT---EEEaaaaaaaaaaaaavalxbbx
1umd_A_1501umd   A151170PPAAGAAISMKLLRTGQVAVHHHHHHHHHHHHTT----EEaaaaaaaaaaaaalavxbbb
1vdc_*_151vdc   -1534PAAHTAAIYAARAELKPLLFHHHHHHHHHHHHTT---EEEaaaaaaaaaaaaavalxbbx
1xad_*_121xad   -1837AALKVLRALDEAEGLGLAYEHHHHHHHHHHHHHT---EEEaaaaaaaaaaaaavavxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1trb_*_151trb   *     FADFLAVIN-ADENINE DINUCLEOTIDE P - 15
1trb_*_151trb   *     FADFLAVIN-ADENINE DINUCLEOTIDE A - 16
1trb_*_151trb   *     FADFLAVIN-ADENINE DINUCLEOTIDE G - 17
1trb_*_151trb   *     FADFLAVIN-ADENINE DINUCLEOTIDE I - 34
1umd_A_1501umd   A     TDPTHIAMIN DIPHOSPHATE F - 173
1umd_A_1501umd   A     MGMAGNESIUM ION G - 174
1umd_A_1501umd   A     TDPTHIAMIN DIPHOSPHATE G - 174
1vdc_*_151vdc   *     FADFLAVIN-ADENINE DINUCLEOTIDE A - 17
1vdc_*_151vdc   *     FADFLAVIN-ADENINE DINUCLEOTIDE F - 34
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1vdc_*_151vdc   * FADFAD BINDING SITE.P - 15
1vdc_*_151vdc   * FADFAD BINDING SITE.A - 16

Clusters included in this Subclass
CLUSTER: HE.5.164