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Information on SUBCLASS 4.39.1
Subclass Accession number: 5695
Subclass: 4.39.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 14.7 +/- 14.9
Average RMSD (Å) : 1.025 +/- 0.287

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XhhXXcXX
(φψ)-conformation: aapbplbb
Pattern: [IV]x[AERS]xxxx[MVY][IL]x[EKP][DG]xx[GIW][ITV]x
Conservation:1.973-0.300-0.187-0.877-0.128-0.680-0.5810.5701.489-0.9750.5541.629-0.286-0.926-0.8350.832-1.271
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bg6_*_881bg6   -91107IAANIASYISEGQLIILHHHHHGGG--TT-EEEEaaaaaaaaxbpgxbbbx
1j3v_A_661j3v   A7288VAEALYPYLREGTYWVDHHHHHTTT--TTEEEEEaaaaaaaapbxvxbbbx
1l5j_A_4791l5j   A479495IHSWLNRMLLPDTVGTGHHHHHGGG--TT-EEEEaaaaaaaaxbplbbbbb
1nz0_A_571nz0   A7086IFRRNKGVIPKGFDIVVHHHHHTTTS-SSEEEEEaaaaaaaaxpbvbxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j3v_A_661j3v   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE E - 68
1j3v_A_661j3v   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE E - 71
1j3v_A_661j3v   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 72
1l5j_A_4791l5j   A     F3SFE3-S4 CLUSTER I - 479
1l5j_A_4791l5j   A     F3SFE3-S4 CLUSTER H - 480
1nz0_A_571nz0   A     MSESELENOMETHIONINE K - 80
1nz0_A_571nz0   A     MSESELENOMETHIONINE G - 81
1nz0_A_571nz0   A     MSESELENOMETHIONINE F - 82
1nz0_A_571nz0   A     MSESELENOMETHIONINE D - 83

Clusters included in this Subclass
CLUSTER: HE.7.100