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Information on SUBCLASS 4.45.1
Subclass Accession number: 5703
Subclass: 4.45.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 15.7 +/- 17.2
Average RMSD (Å) : 1.033 +/- 0.115

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XphhXFhh
(φψ)-conformation: aappbppb
Pattern: [AFM][AG][GKT][ALV][AKV][AGY][AGV]x[AET][KS][GV][GP][STV][F][AMY][MW][ILV]
Conservation:-0.5650.367-0.785-0.345-0.712-0.712-0.639-0.712-0.4920.456-0.5510.645-0.4192.734-0.6391.8340.535
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dys_A_341dys   A3753AAKVKYVQEKVGTFYWIHHHHHHHHHH----EEEaaaaaaaaaabxbxxxb
1nb2_A_591nb2   A5975FGGLVGGATSGPVFAMVHHHHHHHHTSS--BEEEaxgaaaaaaaxpbxxbb
1qjw_A_1181qjw   A120136MATAAAAVAKVPSFMWLHHHHHHHHTTS---EEEaaaaaaaaaaxwbxxxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1qjw_A_1181qjw   A     MANALPHA-D-MANNOSE G - 118
1qjw_A_1181qjw   A     MANALPHA-D-MANNOSE A - 119
1qjw_A_1181qjw   A     MANALPHA-D-MANNOSE M - 120
1qjw_A_1181qjw   A     MANALPHA-D-MANNOSE A - 121
1qjw_A_1181qjw   A     MANALPHA-D-MANNOSE T - 122
1qjw_A_1181qjw   A     MANALPHA-D-MANNOSE A - 123
1qjw_A_1181qjw   A     MANALPHA-D-MANNOSE A - 124
1qjw_A_1181qjw   A     MANALPHA-D-MANNOSE A - 125
1qjw_A_1181qjw   A     MANALPHA-D-MANNOSE A - 126
1qjw_A_1181qjw   A     MANALPHA-D-MANNOSE A - 128
1qjw_A_1181qjw   A     MANALPHA-D-MANNOSE K - 129
1qjw_A_1181qjw   A     GLCGLUCOSE W - 135
1qjw_A_1181qjw   A     GOLGLYCEROL W - 135
1qjw_A_1181qjw   A     GLCGLUCOSE L - 136

Clusters included in this Subclass
CLUSTER: HE.5.348