Information on SUBCLASS 4.45.1 |
Subclass Accession number: 5703
Subclass: 4.45.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 15.7 +/- 17.2 Average RMSD (Å) : 1.033 +/- 0.115 Consensus geometry
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Consensus Sequence: | XphhXFhh |
(φψ)-conformation: | aappbppb |
Pattern: | [AFM] | [AG] | [GKT] | [ALV] | [AKV] | [AGY] | [AGV] | x | [AET] | [KS] | [GV] | [GP] | [STV] | [F] | [AMY] | [MW] | [ILV] |
Conservation: | -0.565 | 0.367 | -0.785 | -0.345 | -0.712 | -0.712 | -0.639 | -0.712 | -0.492 | 0.456 | -0.551 | 0.645 | -0.419 | 2.734 | -0.639 | 1.834 | 0.535 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dys_A_34 | 1dys | A | 37 | 53 | AAKVKYVQEKVGTFYWI | HHHHHHHHHH----EEE | aaaaaaaaaabxbxxxb |
1nb2_A_59 | 1nb2 | A | 59 | 75 | FGGLVGGATSGPVFAMV | HHHHHHHHTSS--BEEE | axgaaaaaaaxpbxxbb |
1qjw_A_118 | 1qjw | A | 120 | 136 | MATAAAAVAKVPSFMWL | HHHHHHHHTTS---EEE | aaaaaaaaaaxwbxxxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qjw_A_118 | 1qjw | A | MANALPHA-D-MANNOSE | G - 118 |
1qjw_A_118 | 1qjw | A | MANALPHA-D-MANNOSE | A - 119 |
1qjw_A_118 | 1qjw | A | MANALPHA-D-MANNOSE | M - 120 |
1qjw_A_118 | 1qjw | A | MANALPHA-D-MANNOSE | A - 121 |
1qjw_A_118 | 1qjw | A | MANALPHA-D-MANNOSE | T - 122 |
1qjw_A_118 | 1qjw | A | MANALPHA-D-MANNOSE | A - 123 |
1qjw_A_118 | 1qjw | A | MANALPHA-D-MANNOSE | A - 124 |
1qjw_A_118 | 1qjw | A | MANALPHA-D-MANNOSE | A - 125 |
1qjw_A_118 | 1qjw | A | MANALPHA-D-MANNOSE | A - 126 |
1qjw_A_118 | 1qjw | A | MANALPHA-D-MANNOSE | A - 128 |
1qjw_A_118 | 1qjw | A | MANALPHA-D-MANNOSE | K - 129 |
1qjw_A_118 | 1qjw | A | GLCGLUCOSE | W - 135 |
1qjw_A_118 | 1qjw | A | GOLGLYCEROL | W - 135 |
1qjw_A_118 | 1qjw | A | GLCGLUCOSE | L - 136 |
Clusters included in this Subclass |
CLUSTER: HE.5.348 |