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Information on SUBCLASS 4.47.1
Subclass Accession number: 5705
Subclass: 4.47.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 12.0 +/- 12.2
Average RMSD (Å) : 0.750 +/- 0.332

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: pXhphXXh
(φψ)-conformation: aapppabb
Pattern: xxx[AFLV][AEGT][AKS]xx[AEKR][ADE]x[EPQ][IL][ADT][AKTV][IV][IMVY][GNT]
Conservation:-1.303-0.006-0.535-0.471-0.7270.334-1.175-0.791-0.023-0.023-0.7290.9162.0530.046-0.5992.4560.2970.281
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1h2e_A_311h2e   A3754AMRLGKRLEAVELAAIYTHHHHHHHTTTS--SEEEEaaaaaaaaaaxxxabbbb
1l1q_A_351l1q   A4259RKEVTAHYKDVPITKVVGHHHHHHHTTTS---EEEEaaaaaaaaaaxwpabbbx
1o57_A_1121o57   A119136GKLFASVFAEREIDVVMTHHHHHHHTTTS--SEEEEaaaaaaaaaaxxbabbbb
2ak3_A_942ak3   A94111LPQAEALDRAYQIDTVINHHHHHHHHTT----EEEEaaaaaaaaaabxxabbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1o57_A_1121o57   A     2PENONAETHYLENE GLYCOL P - 112
1o57_A_1121o57   A     2PENONAETHYLENE GLYCOL S - 113
1o57_A_1121o57   A     2PENONAETHYLENE GLYCOL L - 115
1o57_A_1121o57   A     2PENONAETHYLENE GLYCOL S - 116
1o57_A_1121o57   A     PG4TETRAETHYLENE GLYCOL S - 116
1o57_A_1121o57   A     P6GHEXAETHYLENE GLYCOL A - 127
1o57_A_1121o57   A     P6GHEXAETHYLENE GLYCOL E - 128
1o57_A_1121o57   A     P6GHEXAETHYLENE GLYCOL R - 129
1o57_A_1121o57   A     P6GHEXAETHYLENE GLYCOL E - 130
1o57_A_1121o57   A     P6GHEXAETHYLENE GLYCOL I - 131
1o57_A_1121o57   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID V - 137
2ak3_A_942ak3   A     AMPADENOSINE MONOPHOSPHATE Q - 96

Clusters included in this Subclass
CLUSTER: HE.6.324
CLUSTER: HE.7.162