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Information on SUBCLASS 4.53.1
Subclass Accession number: 5713
Subclass: 4.53.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.1 (>75 %)  1.1.1 (>75 %)  
SCOP : 51430 (>75 %)  51431 (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 16.9 +/- 14.8
Average RMSD (Å) : 0.660 +/- 0.089

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXGhXhph
(φψ)-conformation: aagpppbb
Pattern: x[dgs][ACLTV][AMTV][DHK][afiy][AFL]x[ADKS][aekr][G][FILV][AKNT][APVY][KQR]x
Conservation:-0.905-0.690-0.344-0.1440.496-0.7990.084-0.399-0.277-0.6383.1830.390-0.354-0.5371.137-0.203
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bvy_F_4921bvy   F498513RDLADIAMSKGFAPQVHHHHHHHHTTT---EEaaaaaaaaaavxbxbb
1dq3_A_2661dq3   A270285EDVTHYLNALGIKARIHHHHHHHHTTT---EEaaaaaaaaaavxxbbb
1kht_A_161kht   A2136QLAMDNLRKEGVNYKMHHHHHHHHTTT---EEaaaaaaaaaNgxbxxx
1pkx_A_351pkx   A3550GGTAKALRDAGLAVRDHHHHHHHHTTT---EEaaaaaaaaaavbxbbx
2uag_A_152uag   A1833LSCVDFFLARGVTPRVHHHHHHHHTTT---EEaaaaaaaaaavbxxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bvy_F_4921bvy   F     FMNFLAVIN MONONUCLEOTIDE T - 492
1bvy_F_4921bvy   F     EDO1,2-ETHANEDIOL T - 492
1bvy_F_4921bvy   F     FMNFLAVIN MONONUCLEOTIDE A - 493
1bvy_F_4921bvy   F     FMNFLAVIN MONONUCLEOTIDE E - 494
1bvy_F_4921bvy   F     EDO1,2-ETHANEDIOL G - 495
1bvy_F_4921bvy   F     EDO1,2-ETHANEDIOL T - 496
1bvy_F_4921bvy   F     EDO1,2-ETHANEDIOL D - 499
1pkx_A_351pkx   A     XMPXANTHOSINE-5'-MONOPHOSPHATE G - 35
1pkx_A_351pkx   A     XMPXANTHOSINE-5'-MONOPHOSPHATE G - 36
1pkx_A_351pkx   A     XMPXANTHOSINE-5'-MONOPHOSPHATE T - 37
1pkx_A_351pkx   A     XMPXANTHOSINE-5'-MONOPHOSPHATE A - 38
2uag_A_152uag   A     UMAURIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE L - 15
2uag_A_152uag   A     UMAURIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE T - 16
2uag_A_152uag   A     UMAURIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE G - 17
2uag_A_152uag   A     UMAURIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE M - 34
2uag_A_152uag   A     UMAURIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE D - 35

Clusters included in this Subclass
CLUSTER: HE.7.44