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Information on SUBCLASS 4.54.1
Subclass Accession number: 5714
Subclass: 4.54.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>75 %)  
GO : GO:0008415 (>75 %)  GO:0016614 (>75 %)  GO:0016616 (>75 %)  GO:0016746 (>75 %)  GO:0016747 (>75 %)  
SCOP : 51734 (>75 %)  51735 (>75 %)  51830 (>75 %)  53900 (>75 %)  53901 (>75 %)  53902 (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 18.7 +/- 19.2
Average RMSD (Å) : 0.720 +/- 0.342

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: XhGppGXp
(φψ)-conformation: aalppabb
Pattern: [adst][fhqy][hqw][akl][AFGL]xx[ael][G][kqr][HNPS][GR]x[GRS]x
Conservation:-0.575-0.273-0.161-0.371-0.630-0.617-0.265-0.6883.083-0.034-0.0461.153-0.520-0.055-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dmh_A_2071dmh   A208221TQQLLNQLGRHGNR.HHHHHHHTT---EE.aaaaaaaavbxabb.
1e5m_A_241e5m   A2640DYWQGLMEGRNGIGPHHHHHHHTT---EEEaaaaaaaavxxaxbp
1j3n_A_191j3n   A2135AFHKAQLAGKSGVRPHHHHHHHHT---EEEaaaaaaaavxbaxbx
1kas_*_201kas   -2236STWKALLAGQSGISLHHHHHHHTT---EEEaaaaaaaavxxaxbx
1n93_X_861n93   X86100LHAAFVHGGVPRESYHHHHHHHTT--S-EEaaaaaaaavxxaxxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dmh_A_2071dmh   A     LIO[1-PENTADECANOYL-2-DECANOYL-GLYCEROL-3-YL]PHOSPHONYL CHOLINE Q - 210
1dmh_A_2071dmh   A     LIO[1-PENTADECANOYL-2-DECANOYL-GLYCEROL-3-YL]PHOSPHONYL CHOLINE L - 211
1dmh_A_2071dmh   A     LIO[1-PENTADECANOYL-2-DECANOYL-GLYCEROL-3-YL]PHOSPHONYL CHOLINE Q - 214
1dmh_A_2071dmh   A     FEFE (III) ION R - 221
1dmh_A_2071dmh   A     MCT4-METHYLCATECHOL R - 221

Clusters included in this Subclass
CLUSTER: HE.5.212
CLUSTER: HE.6.193