Information on SUBCLASS 4.56.1 |
Subclass Accession number: 5716
Subclass: 4.56.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : - (>75 %) 2 (>75 %) 3 (>75 %) GO : GO:0016798 (>75 %) GO:0016799 (>75 %) GO:0019104 (>75 %) SCOP : 52140 (>75 %) 52141 (>75 %) 52142 (>75 %) |
Number of loops: 5 Average sequence ID (%) : 36.7 +/- 27.7 Average RMSD (Å) : 0.700 +/- 0.453 Consensus geometry
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Consensus Sequence: | XXpXGhXh |
(φψ)-conformation: | aabblpbb |
Pattern: | [AGKQ] | [V] | [ILV] | [HKRS] | x | [ILY] | [ACNS] | x | [hnr] | [RS] | [AENP] | [G] | [ILV] | [v] | [FV] | [lm] | [CL] | [TW] |
Conservation: | -0.840 | 1.255 | 0.547 | -0.524 | -1.098 | -0.123 | -0.667 | -0.948 | -0.874 | -0.140 | -0.873 | 2.499 | 0.375 | -0.580 | 0.472 | -0.400 | 0.219 | 1.699 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1akz_*_222 | 1akz | - | 228 | 245 | AVVSWLNQNSNGLVFLLW | HHHHHHHHH--S-EEEEE | aaaaaaaaabbvxbbbbb |
1h7s_A_186 | 1h7s | A | 186 | 203 | QVLHAYCIISAGIRVSCT | HHHHHHHHH-TT-EEEEE | aaaaaaaaaxxvbxbbbb |
1lau_E_165 | 1lau | E | 171 | 188 | GVIRRLAARRPGLVFMLW | HHHHHHHHH-TT-EEEEE | aaaaaaaaabxvxxbbbb |
1okb_A_222 | 1okb | A | 228 | 245 | AVIKWLSVNREGVVFLLW | HHHHHHHHH--S-EEEEE | aaaaaaaaabbvxxbbbb |
3eug_A_141 | 3eug | A | 147 | 164 | KVISLINQHREGVVFLLW | HHHHHHHHH-SS-EEEEE | aaaaaaaaabbvxxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1h7s_A_186 | 1h7s | A | MSESELENOMETHIONINE | Q - 186 |
1h7s_A_186 | 1h7s | A | MSESELENOMETHIONINE | V - 187 |
1h7s_A_186 | 1h7s | A | MSESELENOMETHIONINE | L - 188 |
1h7s_A_186 | 1h7s | A | MSESELENOMETHIONINE | H - 189 |
1h7s_A_186 | 1h7s | A | MSESELENOMETHIONINE | C - 202 |
3eug_A_141 | 3eug | A | GOLGLYCEROL | F - 144 |
Clusters included in this Subclass |
CLUSTER: HE.3.211 |
CLUSTER: HE.4.277 |