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Information on SUBCLASS 4.56.1
Subclass Accession number: 5716
Subclass: 4.56.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  2 (>75 %)  3 (>75 %)  
GO : GO:0016798 (>75 %)  GO:0016799 (>75 %)  GO:0019104 (>75 %)  
SCOP : 52140 (>75 %)  52141 (>75 %)  52142 (>75 %)  
Number of loops: 5

Average sequence ID (%) : 36.7 +/- 27.7
Average RMSD (Å) : 0.700 +/- 0.453

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXpXGhXh
(φψ)-conformation: aabblpbb
Pattern: [AGKQ][V][ILV][HKRS]x[ILY][ACNS]x[hnr][RS][AENP][G][ILV][v][FV][lm][CL][TW]
Conservation:-0.8401.2550.547-0.524-1.098-0.123-0.667-0.948-0.874-0.140-0.8732.4990.375-0.5800.472-0.4000.2191.699
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1akz_*_2221akz   -228245AVVSWLNQNSNGLVFLLWHHHHHHHHH--S-EEEEEaaaaaaaaabbvxbbbbb
1h7s_A_1861h7s   A186203QVLHAYCIISAGIRVSCTHHHHHHHHH-TT-EEEEEaaaaaaaaaxxvbxbbbb
1lau_E_1651lau   E171188GVIRRLAARRPGLVFMLWHHHHHHHHH-TT-EEEEEaaaaaaaaabxvxxbbbb
1okb_A_2221okb   A228245AVIKWLSVNREGVVFLLWHHHHHHHHH--S-EEEEEaaaaaaaaabbvxxbbbb
3eug_A_1413eug   A147164KVISLINQHREGVVFLLWHHHHHHHHH-SS-EEEEEaaaaaaaaabbvxxbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h7s_A_1861h7s   A     MSESELENOMETHIONINE Q - 186
1h7s_A_1861h7s   A     MSESELENOMETHIONINE V - 187
1h7s_A_1861h7s   A     MSESELENOMETHIONINE L - 188
1h7s_A_1861h7s   A     MSESELENOMETHIONINE H - 189
1h7s_A_1861h7s   A     MSESELENOMETHIONINE C - 202
3eug_A_1413eug   A     GOLGLYCEROL F - 144

Clusters included in this Subclass
CLUSTER: HE.3.211
CLUSTER: HE.4.277