Information on SUBCLASS 4.60.1 |
Subclass Accession number: 5720
Subclass: 4.60.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.1 (>75 %) 1.1.1 (>75 %) GO : GO:0004022 (>75 %) GO:0008270 (>75 %) GO:0016614 (>75 %) GO:0016616 (>75 %) GO:0046914 (>75 %) SCOP : 51569 (>75 %) 51570 (>75 %) 51734 (>75 %) 51735 (>75 %) 51736 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 33.3 +/- 21.1 Average RMSD (Å) : 0.300 +/- 0.082 Consensus geometry
|
Consensus Sequence: | hTXXKcVp |
(φψ)-conformation: | aallaeba |
Pattern: | [ILP] | x | [ADEK] | [EQR] | [ILV] | [KMR] | [EKR] | [IL] | [T] | [EGNR] | [GS] | [KR] | [GK] | [V] | [DNR] | x | [AV] | [IMY] | x |
Conservation: | -1.118 | -1.197 | -1.029 | 0.222 | 0.391 | -0.551 | 0.072 | 0.639 | 2.305 | -1.133 | 0.812 | 1.256 | 0.175 | 1.472 | -0.356 | -1.361 | 0.073 | -0.555 | -0.117 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1h2b_A_242 | 1h2b | A | 242 | 260 | PVKQVMELTRGRGVNVAMD | HHHHHHHHTTT--EEEEEE | aaaaaaaaalvaexabbbx |
1jqb_A_1223 | 1jqb | A | 1223 | 1241 | IEDQVMKLTNGKGVDRVIM | HHHHHHHHTTTS-EEEEEE | aaaaaaaaalvaebabbbx |
1jvb_A_228 | 1jvb | A | 228 | 246 | PLAEIRRITESKGVDAVID | HHHHHHHHTTTS-EEEEEE | aaaaaaaaalvaexabbbb |
1qor_A_197 | 1qor | A | 197 | 215 | LVERLKEITGGKKVRVVYD | HHHHHHHHTTT--EEEEEE | aaaaaaaaavvaebabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1h2b_A_242 | 1h2b | A | NAJNICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM) | D - 260 |
1jvb_A_228 | 1jvb | A | MSESELENOMETHIONINE | V - 244 |
1jvb_A_228 | 1jvb | A | MSESELENOMETHIONINE | I - 245 |
1jvb_A_228 | 1jvb | A | MSESELENOMETHIONINE | D - 246 |
Clusters included in this Subclass |
CLUSTER: HE.4.229 |