ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 4.77.1

Subclass Accession number: 5737
Subclass: 4.77.1

Type: HE alpha-beta
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1.1 (>50 %)  1.1.1 (>50 %)
GO : GO:0016614 (>50 %)  GO:0016616 (>50 %)
SCOP : 51734 (>75 %)  51735 (>75 %)  51751 (>75 %)

Number of loops: 3

Average sequence ID (%) : 28.1 +/- 17.6
Average RMSD (Å) : 0.333 +/- 0.058

Consensus geometry

d (Å): 15

delta (°): 90-135

theta (°): 135-180

rho (°): 0-45

Consensus Sequence:	XhGphDVh
(φψ)-conformation:	aagbbabb

Pattern:	[GPV]	x	[EKN]	[L]	[IV]	[EKQ]	[AST]	[AV]	[ILT]	[DKS]	[AET]	[FY]	[G]	[KQR]	[ILV]	[D]	[V]	[LMV]	[IV]
Conservation:	-1.474	-1.474	-0.465	0.746	0.462	-0.129	-0.532	-0.390	-0.801	-0.801	-1.003	1.190	1.956	-0.129	-0.061	1.956	0.746	-0.263	0.466

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1gee_A_69	1gee	A	72	90	VINLVQSAIKEFGKLDVMI	HHHHHHHHHHHHS---EEE	aaaaaaaaaaaavbbabbb
1gz6_A_79	1gz6	A	79	97	GEKLVKTALDTFGRIDVVV	HHHHHHHHHHHTS---EEE	aaaaaaaaaaaavbbabbb
1px0_A_59	1px0	A	59	77	PAELIEAVTSAYGQVDVLV	HHHHHHHHHHHHS---EEE	aaaaaaaaaaaagbbabbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1gz6_A_79	1gz6	A	MSESELENOMETHIONINE	I - 93
1gz6_A_79	1gz6	A	MSESELENOMETHIONINE	D - 94
1gz6_A_79	1gz6	A	MSESELENOMETHIONINE	V - 95
1gz6_A_79	1gz6	A	MSESELENOMETHIONINE	V - 96

Clusters included in this Subclass

CLUSTER: HE.4.299