Information on SUBCLASS 5.2.3 |
Subclass Accession number: 5747
Subclass: 5.2.3 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.2 (>50 %) 1.2.1 (>50 %) GO : GO:0016620 (>50 %) GO:0016903 (>50 %) SCOP : 53719 (>75 %) 53720 (>75 %) 53721 (>75 %) |
Number of loops: 9 Average sequence ID (%) : 33.9 +/- 28.8 Average RMSD (Å) : 0.400 +/- 0.158 Consensus geometry
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Consensus Sequence: | hXpXphXXV |
(φψ)-conformation: | aapaapabb |
Pattern: | x | x | x | [acmv] | x | [dhw] | [adepq] | [adenr] | [itv] | [adknr] | [aefk] | [iv] | [agns] | [cf] | [gt] |
Conservation: | -0.883 | -1.104 | 0.063 | -0.533 | -0.854 | 0.977 | -0.809 | -0.473 | 0.871 | -0.681 | -1.008 | 1.803 | -0.005 | 1.625 | 1.010 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a4s_A_222 | 1a4s | A | 226 | 240 | SLLCHHPNVAKVSFT | HHHHH-TT--EEEEE | aaaaaxaaxabbbbb |
1bxs_A_228 | 1bxs | A | 230 | 244 | AAISSHMDVDKVAFT | HHHHT-TT-SEEEEE | aaaaaxaababbbbb |
1euh_A_210 | 1euh | A | 215 | 229 | DYIVEHQAVNFINFT | HHHHH-TT--EEEEE | aaaaapaaxabbbbb |
1ez0_A_211 | 1ez0 | A | 214 | 228 | QALVSHPEIKAVGFT | HHHHH-TT--EEEEE | aaaaaxaaxabbbbb |
1ky8_A_228 | 1ky8 | A | 228 | 242 | EKIVADDRVAAVSFT | HHHHH-TT--EEEEE | aaaaaxaaxabbxbb |
1o04_A_228 | 1o04 | A | 230 | 244 | AAIASHEDVDKVAFT | HHHHT-TT--EEEEE | aaaaaxaaxabbbbb |
1o9j_A_228 | 1o9j | A | 230 | 244 | AAISSHMDVDKVAFT | HHHHT-TT--EEEEE | aaaaaxaaxabbbbb |
1qnx_A_151 | 1qnx | A | 157 | 171 | YTQMVWANTKEVGCG | HHHHT-TT--EEEEE | aaaaaxaaxabbbbb |
1uzb_A_242 | 1uzb | A | 245 | 259 | AYLVEHPRIRFINFT | HHHHT-TT--EEEEE | aaaaaxaaxabbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1o9j_A_228 | 1o9j | A | NDANAD BINDING SITE FOR CHAIN A | G - 229 |
1o9j_A_228 | 1o9j | A | NDANAD BINDING SITE FOR CHAIN A | A - 230 |
1o9j_A_228 | 1o9j | A | NDANAD BINDING SITE FOR CHAIN A | F - 243 |
1o9j_A_228 | 1o9j | A | NDANAD BINDING SITE FOR CHAIN A | T - 244 |
Clusters included in this Subclass |
CLUSTER: HE.5.259 |
CLUSTER: HE.6.46 |