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Information on SUBCLASS 5.3.3
Subclass Accession number: 5755
Subclass: 5.3.3 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 16.7 +/- 15.3
Average RMSD (Å) : 1.300 +/- 0.000

Consensus geometry
d (Å): 17 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: phchphXXh
(φψ)-conformation: aalbbpabb
Pattern: xx[CEY][ALV][ACK][AGN][AILM]xxx[L][DEK]x[AEL][GN][IY][EHS][FIP][DKW][FGKT][AGW][FIY]x
Conservation:-0.524-0.814-0.5810.175-0.1010.0910.149-1.296-0.814-0.7612.4490.872-0.921-0.4172.0930.9060.595-0.481-0.305-1.1890.3101.378-0.814
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e58_A_311e58   A3456VSEAKAAGKLLKEEGYSFDFAYTHHHHHHHHHHHHHTT---SEEEEaaaaaaaaaaaaaavxbbabbbb
1ihu_A_5011ihu   A504526VLEAANLQADLERAGIHPWGWIIHHHHHHHHHHHHHTT----EEEEaaaaaaaaaaaaaavbbpabbbx
1kkh_A_791kkh   A79101KYCLCAIKNTLDYLNIEPKTGFKHHHHHHHHHHHHHTT----S-EEaaaaaaaaaaaaaalbbwabxbb
1pie_A_1011pie   A101123SNYVKGMIVMLKGAGYEIDKGFEHHHHHHHHHHHHHTT----S-EEaaaaaaaaaaaaaavxbxabxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ihu_A_5011ihu   A     ADPADENOSINE-5'-DIPHOSPHATE T - 501
1ihu_A_5011ihu   A     MGMAGNESIUM ION T - 502
1ihu_A_5011ihu   A     ADPADENOSINE-5'-DIPHOSPHATE T - 502
1ihu_A_5011ihu   A     ADPADENOSINE-5'-DIPHOSPHATE P - 503
1ihu_A_5011ihu   A     ADPADENOSINE-5'-DIPHOSPHATE N - 527
1ihu_A_5011ihu   A     ADPADENOSINE-5'-DIPHOSPHATE N - 528
1ihu_A_5011ihu   A     ADPADENOSINE-5'-DIPHOSPHATE S - 529

Clusters included in this Subclass
CLUSTER: HE.7.77