Information on SUBCLASS 5.3.3 |
Subclass Accession number: 5755
Subclass: 5.3.3 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 16.7 +/- 15.3 Average RMSD (Å) : 1.300 +/- 0.000 Consensus geometry
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Consensus Sequence: | phchphXXh |
(φψ)-conformation: | aalbbpabb |
Pattern: | x | x | [CEY] | [ALV] | [ACK] | [AGN] | [AILM] | x | x | x | [L] | [DEK] | x | [AEL] | [GN] | [IY] | [EHS] | [FIP] | [DKW] | [FGKT] | [AGW] | [FIY] | x |
Conservation: | -0.524 | -0.814 | -0.581 | 0.175 | -0.101 | 0.091 | 0.149 | -1.296 | -0.814 | -0.761 | 2.449 | 0.872 | -0.921 | -0.417 | 2.093 | 0.906 | 0.595 | -0.481 | -0.305 | -1.189 | 0.310 | 1.378 | -0.814 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e58_A_31 | 1e58 | A | 34 | 56 | VSEAKAAGKLLKEEGYSFDFAYT | HHHHHHHHHHHHHTT---SEEEE | aaaaaaaaaaaaaavxbbabbbb |
1ihu_A_501 | 1ihu | A | 504 | 526 | VLEAANLQADLERAGIHPWGWII | HHHHHHHHHHHHHTT----EEEE | aaaaaaaaaaaaaavbbpabbbx |
1kkh_A_79 | 1kkh | A | 79 | 101 | KYCLCAIKNTLDYLNIEPKTGFK | HHHHHHHHHHHHHTT----S-EE | aaaaaaaaaaaaaalbbwabxbb |
1pie_A_101 | 1pie | A | 101 | 123 | SNYVKGMIVMLKGAGYEIDKGFE | HHHHHHHHHHHHHTT----S-EE | aaaaaaaaaaaaaavxbxabxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ihu_A_501 | 1ihu | A | ADPADENOSINE-5'-DIPHOSPHATE | T - 501 |
1ihu_A_501 | 1ihu | A | MGMAGNESIUM ION | T - 502 |
1ihu_A_501 | 1ihu | A | ADPADENOSINE-5'-DIPHOSPHATE | T - 502 |
1ihu_A_501 | 1ihu | A | ADPADENOSINE-5'-DIPHOSPHATE | P - 503 |
1ihu_A_501 | 1ihu | A | ADPADENOSINE-5'-DIPHOSPHATE | N - 527 |
1ihu_A_501 | 1ihu | A | ADPADENOSINE-5'-DIPHOSPHATE | N - 528 |
1ihu_A_501 | 1ihu | A | ADPADENOSINE-5'-DIPHOSPHATE | S - 529 |
Clusters included in this Subclass |
CLUSTER: HE.7.77 |