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Information on SUBCLASS 5.3.4
Subclass Accession number: 5756
Subclass: 5.3.4 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 6.3 +/- 7.9
Average RMSD (Å) : 0.750 +/- 0.173

Consensus geometry
d (Å): 17 delta (°): 135-180 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: phhXXhpXX
(φψ)-conformation: aalbbpabb
Pattern: xx[ADKR][DTV]xxx[AENT]xxx[DEH]x[AG][IKL]x[FLPV][DHKT][AGKR][FILT]x
Conservation:-0.259-0.846-0.1140.344-0.6260.106-0.8460.032-0.187-0.334-0.5532.066-0.4073.3430.358-0.846-0.626-0.1140.0320.251-0.773
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bu6_O_3731bu6   O387407QTRDVLEAMQADSGIRLHALRHHHHHHHHHHHHH----SEEEaaaaaaaaaaaaavbbxabbx
1f2d_A_1741f2d   A177197GFADEVINQEVELGIKFDKIVHHHHHHHHHHHHHT---SEEEaaaaaaaaaaaaavbbxabbb
1g0s_A_1051g0s   A105125VEDVARREAIEEAGLIVKRTKHHHHHHHHHHHHH------EEaaaaaaaaaaaaalbbxFxbb
1ufa_A_1551ufa   A161181QIKTGVSTYRRHFAKDPTGFWHHHHHHHHHHHHHSS---BEEaaaaaaaaaaaaalbxxabbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f2d_A_1741f2d   A     PLPPYRIDOXAL-5'-PHOSPHATE C - 199
1f2d_A_1741f2d   A     PLPPYRIDOXAL-5'-PHOSPHATE C - 200
1ufa_A_1551ufa   A     MSESELENOMETHIONINE A - 160
1ufa_A_1551ufa   A     MSESELENOMETHIONINE T - 164
1ufa_A_1551ufa   A     MSESELENOMETHIONINE W - 181

Clusters included in this Subclass
CLUSTER: HE.6.146