Information on SUBCLASS 5.3.4 |
Subclass Accession number: 5756
Subclass: 5.3.4 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 6.3 +/- 7.9 Average RMSD (Å) : 0.750 +/- 0.173 Consensus geometry
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Consensus Sequence: | phhXXhpXX |
(φψ)-conformation: | aalbbpabb |
Pattern: | x | x | [ADKR] | [DTV] | x | x | x | [AENT] | x | x | x | [DEH] | x | [AG] | [IKL] | x | [FLPV] | [DHKT] | [AGKR] | [FILT] | x |
Conservation: | -0.259 | -0.846 | -0.114 | 0.344 | -0.626 | 0.106 | -0.846 | 0.032 | -0.187 | -0.334 | -0.553 | 2.066 | -0.407 | 3.343 | 0.358 | -0.846 | -0.626 | -0.114 | 0.032 | 0.251 | -0.773 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bu6_O_373 | 1bu6 | O | 387 | 407 | QTRDVLEAMQADSGIRLHALR | HHHHHHHHHHHHH----SEEE | aaaaaaaaaaaaavbbxabbx |
1f2d_A_174 | 1f2d | A | 177 | 197 | GFADEVINQEVELGIKFDKIV | HHHHHHHHHHHHHT---SEEE | aaaaaaaaaaaaavbbxabbb |
1g0s_A_105 | 1g0s | A | 105 | 125 | VEDVARREAIEEAGLIVKRTK | HHHHHHHHHHHHH------EE | aaaaaaaaaaaaalbbxFxbb |
1ufa_A_155 | 1ufa | A | 161 | 181 | QIKTGVSTYRRHFAKDPTGFW | HHHHHHHHHHHHHSS---BEE | aaaaaaaaaaaaalbxxabbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f2d_A_174 | 1f2d | A | PLPPYRIDOXAL-5'-PHOSPHATE | C - 199 |
1f2d_A_174 | 1f2d | A | PLPPYRIDOXAL-5'-PHOSPHATE | C - 200 |
1ufa_A_155 | 1ufa | A | MSESELENOMETHIONINE | A - 160 |
1ufa_A_155 | 1ufa | A | MSESELENOMETHIONINE | T - 164 |
1ufa_A_155 | 1ufa | A | MSESELENOMETHIONINE | W - 181 |
Clusters included in this Subclass |
CLUSTER: HE.6.146 |