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Information on SUBCLASS 5.11.3
Subclass Accession number: 5777
Subclass: 5.11.3 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004872 (>50 %)  GO:0004888 (>50 %)  GO:0045012 (>50 %)  
SCOP : 48725 (>75 %)  48726 (>75 %)  48942 (>75 %)  54451 (>75 %)  54452 (>75 %)  54453 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 57.9 +/- 0.6
Average RMSD (Å) : 0.233 +/- 0.058

Consensus geometry
d (Å): 25 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: LpRXXpPpV
(φψ)-conformation: aapbbppbb
Pattern: [LP][E][LT][HRS][T][ST][L][QR][R]xx[EQ][P][NT][V][ATV][I][S][LP]
Conservation:-1.0791.109-0.813-1.0151.109-0.2480.512-0.0831.109-1.142-1.1110.2152.304-0.2160.512-1.0150.5120.512-1.171
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1muj_B_851muj   B85103PETHTSLRRLEQPNVVISLHHHHTGGG--B--EEEEEEaaaaaaaaxbbxpxbbbbx
1s9v_B_791s9v   B85103LELRTTLQRRVEPTVTISPHHHTTGGG--B--EEEEEEaaaaaaaapbbxxbbbbbx
2iad_B_862iad   B86104PETSTSLRRLEQPNVAISLHHHHTGGG--B--EEEEEEaaaaaaaaxbbxxbbbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1s9v_B_791s9v   B     EDO1,2-ETHANEDIOL N - 82
1s9v_B_791s9v   B     EDO1,2-ETHANEDIOL L - 85
1s9v_B_791s9v   B     EDO1,2-ETHANEDIOL E - 86
1s9v_B_791s9v   B     EDO1,2-ETHANEDIOL T - 89
1s9v_B_791s9v   B     EDO1,2-ETHANEDIOL T - 90

Clusters included in this Subclass
CLUSTER: HE.9.65