Information on SUBCLASS 5.16.2 |
Subclass Accession number: 5788
Subclass: 5.16.2 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 6.0 +/- 8.3 Average RMSD (Å) : 1.333 +/- 0.306 Consensus geometry
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Consensus Sequence: | phXpXhpXX |
(φψ)-conformation: | aalbppabb |
Pattern: | [ADS] | x | [AR] | [FL] | x | [ADE] | [KQS] | [IV] | x | [GT] | x | [ILV] | [AKS] | [EQT] | [LMY] | [EHR] | [EKR] | [EHQ] | [AFL] | [AGQ] | [KQ] | [DPS] | [ILP] | [KRT] | [GST] | x | [FHW] | x |
Conservation: | -0.346 | -1.082 | 0.246 | 1.601 | -1.328 | -0.224 | 0.144 | 2.105 | -1.450 | 0.357 | -2.186 | 1.125 | -0.224 | 0.022 | 0.144 | 0.390 | 0.757 | 0.880 | -0.837 | -0.714 | 1.717 | -0.224 | -0.960 | 0.022 | -0.224 | -0.469 | 0.757 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e4f_T_53 | 1e4f | T | 53 | 80 | AIAFKESVNTLLKELEEQLQKSLRSDFV | HHHHHHHHHHHHHHHHHHHTS---S-EE | aaaaaaaaaaaaaaaaaaalbxbaxxxb |
1qba_*_507 | 1qba | - | 509 | 536 | SQRFVDKVIGEIAQMHKEAGQPIKTWHF | HHHHHHHHHHHHHHHHHHHT---S-EEE | aaaaaaaaaaaaaaaaaaavbppabbba |
1ufa_A_155 | 1ufa | A | 155 | 181 | DEALWAQIKTGVSTYRRHFAKDPTGFW. | HHHHHHHHHHHHHHHHHHHSS---BEE. | aaaaaaaaaaaaaaaaaaalbxxabbx. |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ufa_A_155 | 1ufa | A | MSESELENOMETHIONINE | A - 160 |
1ufa_A_155 | 1ufa | A | MSESELENOMETHIONINE | T - 164 |
1ufa_A_155 | 1ufa | A | MSESELENOMETHIONINE | W - 181 |
Clusters included in this Subclass |
CLUSTER: HE.7.141 |