Logo
Information on SUBCLASS 5.34.1
Subclass Accession number: 5813
Subclass: 5.34.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 12.2 +/- 13.0
Average RMSD (Å) : 0.700 +/- 0.354

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: pppXXhpXh
(φψ)-conformation: aapaababb
Pattern: [AGV][emqr][kpq][HILY][agsv][klmt]x[LMT][kns][AENS][DHS][DPS]x[LTV][DHKPS]x[FLV][ltvy]
Conservation:-0.185-0.541-0.441-0.017-0.930-0.597-1.2081.442-0.3800.4540.9701.963-0.3281.381-0.597-1.3191.264-0.930
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a4i_A_781a4i   A8198VMKYITSLNEDSTVHGFLHHHHHHHHHH-TT--EEEaaaaaaaaaaxaaxabbb
1d2n_A_5201d2n   A529546GELLVQQTKNSDRTPLVSHHHHHHHHHH-SS-SEEEaaaaaaaaaaxaababbb
1g64_B_2981g64   B308325VWQHGKRMLADPLLDMVVHHHHHHHHHH-TT-SEEEaaaaaaaaaaxaaxabbb
1ibj_A_3281ibj   A339356ARKIAMYLSSHPRVKKVYHHHHHHHHHT-TT--EEEaaaaaaaaaabaababbb
1mld_A_131mld   A1330GQPLSLLLKNSPLVSRLTHHHHHHHHHT-TT-SEEEaaaaaaaaaaxaababbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1d2n_A_5201d2n   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER V - 522
1g64_B_2981g64   B     MGMAGNESIUM ION D - 327
1g64_B_2981g64   B     ATPADENOSINE-5'-TRIPHOSPHATE D - 327

Clusters included in this Subclass
CLUSTER: HE.5.291
CLUSTER: HE.6.148